RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 BNIP1Q12981 228 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 TSNAXIP1Q2TAA8 658 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 NOL9Q5SY16 702 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 SCYL2Q6P3W7 929 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 ZNF449Q6P9G9 518 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 DRICH1Q6PGQ1 229 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 CCDC80Q76M96 950 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 SPATA18Q8TC71 538 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 FAM167AQ96KS9 214 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 LPIN3Q9BQK8 851 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 ADPGKQ9BRR6 497 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 ZNF518BQ9C0D4 1074 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 XPO7Q9UIA9 1087 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 RABGEF1Q9UJ41 708 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 PROZP22891 400 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 CDH5P33151 784 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 CDH6P55285 790 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 MRPS35P82673 323 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 SPARCL1Q14515 664 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 HADHQ16836 314 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 OR6B2Q6IFH4 312 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 DENND1AQ8TEH3 1009 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 TTC25Q96NG3 672 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 PAFAH2Q99487 392 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 FZD8Q9H461 694 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 SLC17A7Q9P2U7 560 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 USP18Q9UMW8 372 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 SHOC2Q9UQ13 582 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 AKT3Q9Y243 479 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 F5H423 210 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 B4GALT4O60513 344 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 ZNF286BP0CG31 522 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 CYP3A5P20815 502 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 GSTT1P30711 240 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 RNASELQ05823 741 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 PALM2Q8IXS6 379 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 NIPA2Q8N8Q9 360 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 LRRC8CQ8TDW0 803 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 HIC2Q96JB3 615 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 RXFP1Q9HBX9 757 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 DCTN4Q9UJW0 460 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 STRIP2Q9ULQ0 834 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 IGKV6-21A0A0C4DH24 114 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 TGFB3P10600 412 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 INSRRP14616 1297 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 ARL4CP56559 192 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 R3HDM1Q15032 1099 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 DARS2Q6PI48 645 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 BBS12Q6ZW61 710 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 PPIL6Q8IXY8 311 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 NAT8LQ8N9F0 302 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 MAGEB5Q9BZ81 275 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 ETNK1Q9HBU6 452 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 UBN1Q9NPG3 1134 aa12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 PSMC3IPQ9P2W1 217 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF3-201ENST00000389212 A6NHS1 94 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 E5RJQ4 531 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 KRT7P08729 469 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 TAP1Q03518 808 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 PPP1R2P3Q6NXS1 205 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 VSIG1Q86XK7 387 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 TMEM176AQ96HP8 235 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 SPATA17Q96L03 361 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 NR1H4Q96RI1 486 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 TRIM56Q9BRZ2 755 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 IFT122Q9HBG6 1241 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 NPHS2Q9NP85 383 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 FAM49BQ9NUQ9 324 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 RBPJLQ9UBG7 517 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 HAO1Q9UJM8 370 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 CHKBQ9Y259 395 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 HEY1Q9Y5J3 304 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 H7C0C1 242 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 HCRTO43612 131 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 FAM155BO75949 473 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 CCNFP41002 786 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 ELK3P41970 407 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 ATP5OP48047 213 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 NDST1P52848 882 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 GEMIN4P57678 1058 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 GRM1Q13255 1194 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 KCTD2Q14681 263 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 SMAD1Q15797 465 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 LCA5Q86VQ0 697 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 RXFP2Q8WXD0 754 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 HPDLQ96IR7 371 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 MMP19Q99542 508 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 C2orf40Q9H1Z8 148 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 NGRNQ9NPE2 291 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 ZNF180Q9UJW8 692 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 TMA7Q9Y2S6 64 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 NR2E3Q9Y5X4 410 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 ACTL7BQ9Y614 415 aa12.18□□□□□ -0.46
RAPGEF3-201ENST00000389212 MCF2LO15068 1137 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 MED7O43513 233 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 CILPO75339 1184 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 CBX6O95503 412 aa12.17□□□□□ -0.46
RAPGEF3-201ENST00000389212 TRUB2O95900 331 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms