RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 B4GALNT2Q8NHY0 566 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 RBM46Q8TBY0 533 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 TEKT4Q8WW24 435 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 FICDQ9BVA6 458 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 TRIM15Q9C019 465 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 FHDC1Q9C0D6 1143 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 ABCG8Q9H221 673 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 TMEM161AQ9NX61 479 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 RAB21Q9UL25 225 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 CRYL1Q9Y2S2 319 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 MYO5BQ9ULV0 1848 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 PREX1Q8TCU6 1659 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 MEIS2O14770 477 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 DCXO43602 365 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 ATP6V1E1P36543 226 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 PTPN11Q06124 597 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 N4BP2L1Q5TBK1 243 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 SNX31Q8N9S9 440 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 RAET1EQ8TD07 263 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 SCFD2Q8WU76 684 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 SPOCK2Q92563 424 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 DNAJC19Q96DA6 116 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 ROPN1BQ9BZX4 212 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 ROPN1Q9HAT0 212 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 DDX28Q9NUL7 540 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 FAM198AQ9UFP1 575 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 PRKAG2Q9UGJ0 569 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 MTO1Q9Y2Z2 717 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 FAM237BA0A1B0GVD1 139 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 LACTBL1A8MY62 500 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 HBP1O60381 514 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 MICAL2O94851 1124 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 LTFP02788 710 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 MIPP30301 263 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 ADSLP30566 484 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 PDK1Q15118 436 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 SYDE1Q6ZW31 735 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 OTOAQ7RTW8 1153 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 SCUBE1Q8IWY4 988 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 OR5B17Q8NGF7 314 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 ALG3Q92685 438 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 NAF1Q96HR8 494 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 MTMR9Q96QG7 549 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 APBA2Q99767 749 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 ROGDIQ9GZN7 287 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 AK5Q9Y6K8 562 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 ASTN1O14525 1302 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 ENTPD5O75356 428 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 CENPCQ03188 943 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 OCA2Q04671 838 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 ACAP1Q15027 740 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 TMEM119Q4V9L6 283 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 SCIMPQ6UWF3 145 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 LRRC55Q6ZSA7 311 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 FASTKD5Q7L8L6 764 aaKnown RBP5.15□□□□□ -1.58
LTN1-202ENST00000389194 SLFN11Q7Z7L1 901 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 MFN1Q8IWA4 741 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 ABRAQ8N0Z2 381 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 GPRC5AQ8NFJ5 357 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 GPR152Q8TDT2 470 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 TMEM176AQ96HP8 235 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 MAGEB18Q96M61 343 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 DCUN1D5Q9BTE7 237 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 RNPEPQ9H4A4 650 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 PRMT7Q9NVM4 692 aaPredicted RBP5.15□□□□□ -1.58
LTN1-202ENST00000389194 WDR35Q9P2L0 1181 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 NR2E3Q9Y5X4 410 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 CNTNAP2Q9UHC6 1331 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 PIK3CDO00329 1044 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 FOXP2O15409 715 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 B4GALT5O43286 388 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 PPP1R11O60927 126 aaPredicted RBP5.15□□□□□ -1.58
LTN1-202ENST00000389194 TKTL1P51854 596 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 GTF2A2P52657 109 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 RHBDL3P58872 404 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 NRF1Q16656 503 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 DGKDQ16760 1214 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 FAM83EQ2M2I3 478 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 POM121L1PQ3SYA9 428 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 KBTBD12Q3ZCT8 623 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 ZC3H12BQ5HYM0 836 aaKnown RBP5.15□□□□□ -1.58
LTN1-202ENST00000389194 SDHAF4Q5VUM1 108 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 ADGRF2Q8IZF7 708 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 P2RX7Q99572 595 aaKnown RBP5.15□□□□□ -1.58
LTN1-202ENST00000389194 TMEM51Q9NW97 253 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 KCND2Q9NZV8 630 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 CCDC167Q9P0B6 97 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 PLA2G4CQ9UP65 541 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 SLC30A1Q9Y6M5 507 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 GAKO14976 1311 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 CNTNAP4Q9C0A0 1308 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 COL5A2P05997 1499 aaPredicted RBP5.15□□□□□ -1.58
LTN1-202ENST00000389194 GTPBP10A4D1E9 387 aaKnown RBP5.15□□□□□ -1.58
LTN1-202ENST00000389194 H0Y626 953 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 TBC1D12O60347 775 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 FAM155BO75949 473 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 TRIM16O95361 564 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 USP17L7P0C7H9 530 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 SOAT1P35610 550 aa5.15□□□□□ -1.58
LTN1-202ENST00000389194 TAF6P49848 677 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms