RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 CWF19L1Q69YN2 538 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 FAM9CQ8IZT9 166 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 UBXN6Q9BZV1 441 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 WDR12Q9GZL7 423 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 AK5Q9Y6K8 562 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 MAP2K7O14733 419 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 ITGAXP20702 1163 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 WARSP23381 471 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 AVPR1AP37288 418 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 TUBA4AP68366 448 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 CLEC16AQ2KHT3 1053 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 TIMM50Q3ZCQ8 353 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 SYTL3Q4VX76 610 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 TTC30BQ8N4P2 665 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 KIFC1Q9BW19 673 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 NCKIPSDQ9NZQ3 722 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 STARD13Q9Y3M8 1113 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 PXDNLA1KZ92 1463 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 IGSF1Q8N6C5 1336 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 RBM43Q6ZSC3 357 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 UXS1Q8NBZ7 420 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 RBM46Q8TBY0 533 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 NUAK2Q9H093 628 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 TMEM8AQ9HCN3 771 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 VPS9D1Q9Y2B5 631 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 CSE1LP55060 971 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 BNC1Q01954 994 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 MCL1Q07820 350 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 EZH2Q15910 746 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 NAPEPLDQ6IQ20 393 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 LRRN4CLQ8ND94 238 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 ZNF624Q9P2J8 865 aaPredicted RBP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 MYMKA6NI61 221 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 PTGES3LE9PB15 166 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 KCNA6P17658 529 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 C11orf63Q6NUN7 778 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 UGT3A1Q6NUS8 523 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 C11orf74Q86VG3 221 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 SLC26A11Q86WA9 606 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 ZNF446Q9NWS9 450 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 EHD3Q9NZN3 535 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 RPS6KL1Q9Y6S9 549 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 UNC5CO95185 931 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 LDLRP01130 860 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 IL6STP40189 918 aaPredicted RBP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 CDK16Q00536 496 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 RAD51Q06609 339 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 NCOA4Q13772 614 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 TYW3Q6IPR3 259 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 DHRSXQ8N5I4 330 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 DPP10Q8N608 796 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 DGCR6LQ9BY27 220 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 KIAA1683Q9H0B3 1180 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 RPRD1BQ9NQG5 326 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 TJP2Q9UDY2 1190 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 VTI1BQ9UEU0 232 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 VAV3Q9UKW4 847 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 RNF112Q9ULX5 631 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 SDR42E2A6NKP2 422 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 ATG7O95352 703 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 ME2P23368 584 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 NRF1Q16656 503 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 AGKQ53H12 422 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 CYP4Z1Q86W10 505 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 CASZ1Q86V15 1759 aa12.8□□□□□ -0.36
SRGAP3-202ENST00000383836 PPEF1O14829 653 aaPredicted RBP12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 VAC14Q08AM6 782 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 ACAD10Q6JQN1 1059 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 TNIP3Q96KP6 325 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 CACNA1CQ13936 2221 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 SUPT7LO94864 414 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 SNRPFP62306 86 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 SHROOM1Q2M3G4 852 aaPredicted RBP12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 TRPC4APQ8TEL6 797 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 NAT9Q9BTE0 207 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 GDF3Q9NR23 364 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 A0A087X0T9 212 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 INPP4BO15327 924 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 SEMA3DO95025 777 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 PGM3O95394 542 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 FAM228BP0C875 321 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 ALDH1A3P47895 512 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 AKR1D1P51857 326 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 TNFRSF8P28908 595 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 NME5P56597 212 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 SLC7A5P2Q9GIP4 190 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 POLR1BQ9H9Y6 1135 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 ERAP1Q9NZ08 941 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 NEURL4Q96JN8 1562 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 NUP214P35658 2090 aaPredicted RBP12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 F8W810 466 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 PCSK7Q16549 785 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 NDNQ99608 321 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 UBE2OQ9C0C9 1292 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 USP42Q9H9J4 1324 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 ZNF846Q147U1 533 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 USP39Q53GS9 565 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 STOX1Q6ZVD7 989 aa12.79□□□□□ -0.36
SRGAP3-202ENST00000383836 EEPD1Q7L9B9 569 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms