RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 PRPSAP2O60256 369 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 RCOR2Q8IZ40 523 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 DEFB106AQ8N104 65 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 ARHGAP18Q8N392 663 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 SPATA4Q8NEY3 305 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 ZNF461Q8TAF7 563 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 FAM172AQ8WUF8 416 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 UBXN4Q92575 508 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 CENPIQ92674 756 aaPredicted RBP25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 TBCBQ99426 244 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 CLSTN3Q9BQT9 956 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 C11orf84Q9BUA3 381 aaPredicted RBP25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 EHD2Q9NZN4 543 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 USP18Q9UMW8 372 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 GOLGA6L10A0A0M3HER8 536 aa25.67■■□□□ 1.7
ECHDC3-201ENST00000379215 CTSAP10619 480 aa25.67■■□□□ 1.7
ECHDC3-201ENST00000379215 PYGMP11217 842 aa25.67■■□□□ 1.7
ECHDC3-201ENST00000379215 MIPP30301 263 aa25.67■■□□□ 1.7
ECHDC3-201ENST00000379215 COPS2P61201 443 aa25.67■■□□□ 1.7
ECHDC3-201ENST00000379215 SMC1AQ14683 1233 aaKnown RBP25.67■■□□□ 1.7
ECHDC3-201ENST00000379215 ZFYVE27Q5T4F4 411 aa25.67■■□□□ 1.7
ECHDC3-201ENST00000379215 MAIP1Q8WWC4 291 aa25.67■■□□□ 1.7
ECHDC3-201ENST00000379215 SEPT5Q99719 369 aaPredicted RBP25.67■■□□□ 1.7
ECHDC3-201ENST00000379215 ZBP1Q9H171 429 aa25.67■■□□□ 1.7
ECHDC3-201ENST00000379215 NGRNQ9NPE2 291 aaKnown RBP25.67■■□□□ 1.7
ECHDC3-201ENST00000379215 YJEFN3A6XGL0 299 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 E7ENQ6 273 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 FGGP02679 453 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 BMPR1AP36894 532 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 ATP11AP98196 1134 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 ZNF211Q13398 564 aaPredicted RBP25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 RAB33AQ14088 237 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 PPP2R5EQ16537 467 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 CDO1Q16878 200 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 LONRF2Q1L5Z9 754 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 C15orf59Q2T9L4 293 aaPredicted RBP25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 BOLA3Q53S33 107 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 DCAF6Q58WW2 860 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 DAB2IPQ5VWQ8 1189 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 DENND5BQ6ZUT9 1274 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 ARFGAP1Q8N6T3 406 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 NT5C3BQ969T7 300 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 SCML2Q9UQR0 700 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 KIAA1671Q9BY89 1806 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 UQCRHLA0A096LP55 91 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 CCDC188H7C350 402 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 ABLIM3O94929 683 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 KRT1P04264 644 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 UQCRHP07919 91 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 CTNNB1P35222 781 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 GJC1P36383 396 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 SULT1E1P49888 294 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 RABGGTBP53611 331 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 DUSP4Q13115 394 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 DDR2Q16832 855 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 COL13A1Q5TAT6 717 aaPredicted RBP25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 CCDC70Q6NSX1 233 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 KLHL23Q8NBE8 558 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 TEKT4Q8WW24 435 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 RXFP1Q9HBX9 757 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 IL37Q9NZH6 218 aa25.66■■□□□ 1.7
ECHDC3-201ENST00000379215 TRUB2O95900 331 aaKnown RBP25.65■■□□□ 1.7
ECHDC3-201ENST00000379215 ATF2P15336 505 aa25.65■■□□□ 1.7
ECHDC3-201ENST00000379215 RPL17P18621 184 aaKnown RBP25.65■■□□□ 1.7
ECHDC3-201ENST00000379215 UBE3AQ05086 875 aa25.65■■□□□ 1.7
ECHDC3-201ENST00000379215 BHLHA9Q7RTU4 235 aa25.65■■□□□ 1.7
ECHDC3-201ENST00000379215 CCDC50Q8IVM0 306 aa25.65■■□□□ 1.7
ECHDC3-201ENST00000379215 NPY6RQ99463 290 aa25.65■■□□□ 1.7
ECHDC3-201ENST00000379215 ABCC13Q9NSE7 274 aa25.65■■□□□ 1.7
ECHDC3-201ENST00000379215 MTUS1Q9ULD2 1270 aa25.65■■□□□ 1.7
ECHDC3-201ENST00000379215 ADAM12O43184 909 aa25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 VNN2O95498 520 aa25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 NCAM1P13591 858 aa25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 PTPN7P35236 360 aa25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 MAGEA10P43363 369 aaPredicted RBP25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 RSRC2Q7L4I2 434 aaKnown RBP25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 MON1AQ86VX9 555 aa25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 SLC13A5Q86YT5 568 aaPredicted RBP25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 SCAMP5Q8TAC9 235 aa25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 NDRG1Q92597 394 aaKnown RBP25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 SAMD11Q96NU1 681 aa25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 SLC27A5Q9Y2P5 690 aa25.64■■□□□ 1.7
ECHDC3-201ENST00000379215 FAM92AA1XBS5 289 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 KRIT1O00522 736 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 ENDOD1O94919 500 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 F9P00740 461 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 RB1P06400 928 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 RDXP35241 583 aaKnown RBP25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 PSEN1P49768 467 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 HDAC4P56524 1084 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 YWHAGP61981 247 aaKnown RBP eCLIP25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 BSPRYQ5W0U4 402 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 PGAP3Q96FM1 320 aaPredicted RBP25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 ZWILCHQ9H900 591 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 PCSK1NQ9UHG2 260 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 LCHNA4D1U4 455 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 LINC01553A4QN01 128 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 C5orf67F2Z3F1 127 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 MDM4O15151 490 aa25.63■■□□□ 1.69
ECHDC3-201ENST00000379215 LILRB3O75022 631 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms