RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 TRAPPC12Q8WVT3 735 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 ZNF558Q96NG5 402 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 GID8Q9NWU2 228 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 IQGAP3Q86VI3 1631 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 GLTPD2A6NH11 291 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 SUPT7LO94864 414 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 JCHAINP01591 159 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 CHI3L1P36222 383 aaPredicted RBP11.29□□□□□ -0.6
LINC00654-201ENST00000379053 RENBPP51606 427 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 PTPN11Q06124 597 aaPredicted RBP11.29□□□□□ -0.6
LINC00654-201ENST00000379053 PWP1Q13610 501 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 C2CD6Q53TS8 623 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 JAMLQ86YT9 394 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 SPIRE2Q8WWL2 714 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 VPS50Q96JG6 964 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 SPACA7Q96KW9 195 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 POP1Q99575 1024 aaKnown RBP11.29□□□□□ -0.6
LINC00654-201ENST00000379053 FRMD8Q9BZ67 464 aaPredicted RBP11.29□□□□□ -0.6
LINC00654-201ENST00000379053 YIPF3Q9GZM5 350 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 PPCSQ9HAB8 311 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 SGPL1O95470 568 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 PCNAP12004 261 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 AXLP30530 894 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 KCNJ1P48048 391 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 ITGA8P53708 1063 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 DENND1BQ6P3S1 775 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 CTU1Q7Z7A3 348 aaKnown RBP11.29□□□□□ -0.6
LINC00654-201ENST00000379053 RANBP17Q9H2T7 1088 aaKnown RBP11.29□□□□□ -0.6
LINC00654-201ENST00000379053 AGRPO00253 132 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 AGTP01019 485 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 PGM1P36871 562 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 THOP1P52888 689 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 ALDH6A1Q02252 535 aaKnown RBP11.29□□□□□ -0.6
LINC00654-201ENST00000379053 ACOX1Q15067 660 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 Q4G0T1 1027 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 SLC39A12Q504Y0 691 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 FBXO22Q8NEZ5 403 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 NLNQ9BYT8 704 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 CISHQ9NSE2 258 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 SPG21Q9NZD8 308 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 CROCC2H7BZ55 1655 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 RBAK-RBAKDNI3L0D1 243 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 RAMP2O60895 175 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 RTN3O95197 1032 aaPredicted RBP11.28□□□□□ -0.6
LINC00654-201ENST00000379053 GNRH1P01148 92 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 CNTN2Q02246 1040 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 RAB30Q15771 203 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 PRR23CQ6ZRP0 262 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 TFAP2DQ7Z6R9 452 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 ELOA2Q8IYF1 753 aaPredicted RBP11.28□□□□□ -0.6
LINC00654-201ENST00000379053 C1QTNF7Q9BXJ2 289 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 ZCCHC2Q9C0B9 1178 aaKnown RBP11.28□□□□□ -0.6
LINC00654-201ENST00000379053 TCP11X1B4DZS4 312 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 SP100P23497 879 aaPredicted RBP11.28□□□□□ -0.6
LINC00654-201ENST00000379053 KLK7P49862 253 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 ILDR2Q71H61 639 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 ZNF410Q86VK4 478 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 APOL2Q9BQE5 337 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 NPHS2Q9NP85 383 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 MRGBPQ9NV56 204 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00654-201ENST00000379053 ATP5BP06576 529 aaKnown RBP11.28□□□□□ -0.6
LINC00654-201ENST00000379053 CTSEP14091 401 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 DOK6Q6PKX4 331 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 FIBCD1Q8N539 461 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00654-201ENST00000379053 SMARCD1Q96GM5 515 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 VPS51Q9UID3 782 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 GNG14A0A1W2PPG7 69 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 GOLGA8TH3BQL2 631 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 AIM2O14862 343 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 TAL1P17542 331 aaPredicted RBP11.28□□□□□ -0.6
LINC00654-201ENST00000379053 OR1E1P30953 314 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 CYP24A1Q07973 514 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 LAYNQ6UX15 382 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 CEP70Q8NHQ1 597 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 INPP5DQ92835 1189 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 OSBPL10Q9BXB5 764 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 ZNF518BQ9C0D4 1074 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 FOXN3O00409 490 aaPredicted RBP11.28□□□□□ -0.6
LINC00654-201ENST00000379053 PLA2G6O60733 806 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 PGK1P00558 417 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 POLR2EP19388 210 aaKnown RBP11.28□□□□□ -0.6
LINC00654-201ENST00000379053 PTPN3P26045 913 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 MAPK1P28482 360 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 HALP42357 657 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 ERFP50548 548 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 UBE3AQ05086 875 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 KYNUQ16719 465 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 HLA-DQA1Q5Y7H0 255 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 NLRP14Q86W24 1093 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 TINF2Q9BSI4 451 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 THAP2Q9H0W7 228 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 DMAP1Q9NPF5 467 aaPredicted RBP11.28□□□□□ -0.6
LINC00654-201ENST00000379053 ZC4H2Q9NQZ6 224 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 NFASCO94856 1347 aa11.28□□□□□ -0.6
LINC00654-201ENST00000379053 MGAT4DA6NG13 374 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 PSTPIP1O43586 416 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 RASSF9O75901 435 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms