RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 ZNF362Q5T0B9 420 aaPredicted RBP16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 POTEHQ6S545 545 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 SPOCD1Q6ZMY3 1216 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 CRLF3Q8IUI8 442 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 SLF2Q8IX21 1173 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 GRIN3AQ8TCU5 1115 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 TFB1MQ8WVM0 346 aaKnown RBP16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 NT5C1BQ96P26 610 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 GLT8D2Q9H1C3 349 aa16.28■□□□□ 0.2
CSNK1A1-202ENST00000377843 ASTN2O75129 1339 aaPredicted RBP16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 KBTBD13C9JR72 458 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 TLR3O15455 904 aaKnown RBP16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 CSDE1O75534 798 aaKnown RBP16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 INHBAP08476 426 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 CD1EP15812 388 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 RPL22P35268 128 aaKnown RBP16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 GPC3P51654 580 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 NR1H2P55055 460 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 HDAC4P56524 1084 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 PSMC5P62195 406 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 RELAQ04206 551 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 ATG14Q6ZNE5 492 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 ERI1Q8IV48 349 aaKnown RBP16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 RCOR2Q8IZ40 523 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 GIPC3Q8TF64 312 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 RAB20Q9NX57 234 aa16.27■□□□□ 0.2
CSNK1A1-202ENST00000377843 LY75O60449 1722 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 hCG_1818297A0A087WSY0 165 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 LOC100653049A0A140TA62 436 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 PMM2O15305 246 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 E2F6O75461 281 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 PSMD10O75832 226 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 KRT34O76011 436 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 C1QAP02745 245 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 ZNF76P36508 570 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 GJA8P48165 433 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 RXRGP48443 463 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 ZNF252P-AS1Q0IIN9 211 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 C16orf72Q14CZ0 275 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 KCTD21Q4G0X4 260 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 ATG16L1Q676U5 607 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 KRT39Q6A163 491 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 FRMD7Q6ZUT3 714 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 MAVSQ7Z434 540 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 NUDCD3Q8IVD9 361 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 SLC35B2Q8TB61 432 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 RSL24D1Q9UHA3 163 aaKnown RBP16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 RAB26Q9ULW5 256 aa16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 GNEQ9Y223 722 aaKnown RBP16.27■□□□□ 0.19
CSNK1A1-202ENST00000377843 CXorf49A8MYA2 514 aaPredicted RBP16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 FOXD2O60548 495 aaPredicted RBP16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 SIN3BO75182 1162 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 ZFXP17010 805 aaPredicted RBP16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 L1CAMP32004 1257 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 HALP42357 657 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 DYNLT1P63172 113 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 CREB5Q02930 508 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 BMPR2Q13873 1038 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 ADRM1Q16186 407 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 TMEM53Q6P2H8 277 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 RSPH3Q86UC2 560 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 TICAM1Q8IUC6 712 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 FBXW8Q8N3Y1 598 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 MKL1Q969V6 931 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 ZNHIT2Q9UHR6 403 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 XPO7Q9UIA9 1087 aaKnown RBP16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 COQ4Q9Y3A0 265 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 UGT1A9O60656 530 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 ADAM23O75077 832 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 FAM58BPP0C7Q3 252 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 WASHC5Q12768 1159 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 GRAMD4Q6IC98 578 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 PACS1Q6VY07 963 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 CPNE9Q8IYJ1 553 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 LILRA2Q8N149 483 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 CCDC33Q8N5R6 958 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 LZTR1Q8N653 840 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 HSPH1Q92598 858 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 KCNN1Q92952 543 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 UGT1A7Q9HAW7 530 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 UGT1A10Q9HAW8 530 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 UGT1A8Q9HAW9 530 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 PSMD13Q9UNM6 376 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 IKBKGQ9Y6K9 419 aa16.26■□□□□ 0.19
CSNK1A1-202ENST00000377843 HTR3EA5X5Y0 456 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 F8VP50 259 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 IPO5O00410 1097 aaKnown RBP16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 AVILO75366 819 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 RFPL1O75677 317 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 SHMT1P34896 483 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 PSMD6Q15008 389 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 TGFBIQ15582 683 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 SLC27A3Q5K4L6 730 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 C12orf56Q8IXR9 622 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 DDI1Q8WTU0 396 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 NLRP4Q96MN2 994 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 SH2D3AQ9BRG2 576 aa16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 DDX4Q9NQI0 724 aaKnown RBP16.25■□□□□ 0.19
CSNK1A1-202ENST00000377843 SPATA7Q9P0W8 599 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms