RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 AGRPO00253 132 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 FOXN3O00409 490 aaPredicted RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 FOXP2O15409 715 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 RHOAP61586 193 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 MTFR1Q15390 333 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 ZNF697Q5TEC3 545 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 SLC25A41Q8N5S1 370 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 MCEEQ96PE7 176 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 ADNPQ9H2P0 1102 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 C11orf49Q9H6J7 331 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 TEKT2Q9UIF3 430 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 APOA1P02647 267 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 HLA-DPA1P20036 260 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 BTKQ06187 659 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 HIST2H2ACQ16777 129 aaPredicted RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 HIST2H2AA3Q6FI13 130 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 CYB5D1Q6P9G0 228 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 PGLYRP2Q96PD5 576 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 NR1H4Q96RI1 486 aaPredicted RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 COPS7BQ9H9Q2 264 aaPredicted RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 DDIT4Q9NX09 232 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 GARTP22102 1010 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 PBLDP30039 288 aaPredicted RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 GEMIN4P57678 1058 aaKnown RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 STAT4Q14765 748 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 IL17AQ16552 155 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 RIOX2Q8IUF8 465 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 NOA1Q8NC60 698 aaKnown RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 NAF1Q96HR8 494 aaKnown RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 SPACA7Q96KW9 195 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 RAD18Q9NS91 495 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 NALCNQ8IZF0 1738 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 SLITRK3O94933 977 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 KCNA2P16389 499 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 PON1P27169 355 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 MRPS35P82673 323 aaKnown RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 BTNL9Q6UXG8 535 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 RBM43Q6ZSC3 357 aaKnown RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 RHOT1Q8IXI2 618 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 ERLEC1Q96DZ1 483 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 AGAP3Q96P47 875 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 UBXN6Q9BZV1 441 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 TRAV19A0A0A6YYK7 116 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 STX7O15400 261 aaKnown RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 POLR2EP19388 210 aaKnown RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 AGBL2Q5U5Z8 902 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 ZNF557Q8N988 423 aaPredicted RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 MTMR12Q9C0I1 747 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 FBXO44Q9H4M3 255 aa11.19□□□□□ -0.62
HIF3A-205ENST00000377670 UTP6Q9NYH9 597 aaKnown RBP11.19□□□□□ -0.62
HIF3A-205ENST00000377670 HEATR9A2RTY3 570 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 FAM107AO95990 144 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 MZF1P28698 734 aaPredicted RBP11.18□□□□□ -0.62
HIF3A-205ENST00000377670 KCNJ1P48048 391 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 ARSEP51690 589 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 RAP1GDS1P52306 607 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 SNRPFP62306 86 aaKnown RBP11.18□□□□□ -0.62
HIF3A-205ENST00000377670 FSTL1Q12841 308 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 CYLC2Q14093 348 aaPredicted RBP11.18□□□□□ -0.62
HIF3A-205ENST00000377670 SUGP1Q8IWZ8 645 aaKnown RBP11.18□□□□□ -0.62
HIF3A-205ENST00000377670 ABHD8Q96I13 439 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 SNTG2Q9NY99 539 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 SLIT3O75094 1523 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 PDZK1P1A8MUH7 402 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 RTN2O75298 545 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 INHAP05111 366 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 GTF2H1P32780 548 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 RAB30Q15771 203 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 CRY2Q49AN0 593 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 DAB2IPQ5VWQ8 1189 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 ADCK1Q86TW2 530 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 SPG21Q9NZD8 308 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 DEAF1O75398 565 aaPredicted RBP11.18□□□□□ -0.62
HIF3A-205ENST00000377670 ARIH2O95376 493 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 MAP3K6O95382 1288 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 SGPL1O95470 568 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 KRT8P05787 483 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 HMOX2P30519 316 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 DLK2Q6UY11 383 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 C4orf33Q8N1A6 199 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 THTPAQ9BU02 230 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 CELF4Q9BZC1 486 aaKnown RBP11.18□□□□□ -0.62
HIF3A-205ENST00000377670 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 IRS2Q9Y4H2 1338 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 CDY2AQ9Y6F7 541 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 CNTNAP2Q9UHC6 1331 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 CCDC78A2IDD5 438 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 RAD51CO43502 376 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 IL10P22301 178 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 GRK3P35626 688 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 TRIM65Q6PJ69 517 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 CATSPERGQ6ZRH7 1159 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 ZNF410Q86VK4 478 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 CNPY4Q8N129 248 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 GALNT4Q8N4A0 578 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 THAP2Q9H0W7 228 aa11.18□□□□□ -0.62
HIF3A-205ENST00000377670 ASTN2O75129 1339 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 RTN3O95197 1032 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms