RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 FERMT1Q9BQL6 677 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 TACO1Q9BSH4 297 aaKnown RBP12.76□□□□□ -0.37
UBR4-203ENST00000375225 KLC2Q9H0B6 622 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 ACSS3Q9H6R3 686 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 TXLNGQ9NUQ3 528 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 CYTH4Q9UIA0 394 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 TSPAN16Q9UKR8 245 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 CITO14578 2027 aa12.76□□□□□ -0.37
UBR4-203ENST00000375225 CLUHO75153 1309 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 ENDOD1O94919 500 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 CD4P01730 458 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 GJB1P08034 283 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 C6orf222P0C671 652 aaPredicted RBP12.75□□□□□ -0.37
UBR4-203ENST00000375225 ETS1P14921 441 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 ACADSBP45954 432 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 PSEN2P49810 448 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 GTF2A1P52655 376 aaPredicted RBP12.75□□□□□ -0.37
UBR4-203ENST00000375225 CBLBQ13191 982 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 DPYSL3Q14195 570 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 KCNT1Q5JUK3 1230 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 SLC27A1Q6PCB7 646 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 C3orf62Q6ZUJ4 267 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 BZW1Q7L1Q6 419 aaKnown RBP12.75□□□□□ -0.37
UBR4-203ENST00000375225 CDR2LQ86X02 465 aaPredicted RBP12.75□□□□□ -0.37
UBR4-203ENST00000375225 CDKL3Q8IVW4 592 aaPredicted RBP12.75□□□□□ -0.37
UBR4-203ENST00000375225 TMEM192Q8IY95 271 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 CYP4X1Q8N118 509 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 EMC1Q8N766 993 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 TRPV1Q8NER1 839 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 RAET1EQ8TD07 263 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 RXFP2Q8WXD0 754 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 ACSF2Q96CM8 615 aaPredicted RBP12.75□□□□□ -0.37
UBR4-203ENST00000375225 ZNF668Q96K58 619 aaPredicted RBP12.75□□□□□ -0.37
UBR4-203ENST00000375225 ZNF560Q96MR9 790 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 RAB3IPQ96QF0 476 aaPredicted RBP12.75□□□□□ -0.37
UBR4-203ENST00000375225 ZNF670Q9BS34 389 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.75□□□□□ -0.37
UBR4-203ENST00000375225 ZMYND8Q9ULU4 1186 aaPredicted RBP12.75□□□□□ -0.37
UBR4-203ENST00000375225 USH1CQ9Y6N9 552 aa12.75□□□□□ -0.37
UBR4-203ENST00000375225 MDM4O15151 490 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 FKTNO75072 461 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 ASMTLO95671 621 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 VTNP04004 478 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 SMIM10L2AP0DMW4 78 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 SMIM10L2BP0DMW5 78 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 TROVE2P10155 538 aaKnown RBP eCLIP12.74□□□□□ -0.37
UBR4-203ENST00000375225 TAC1P20366 129 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 PNPLA4P41247 253 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 RASSF2P50749 326 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 PRMT2P55345 433 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 GJA9P57773 515 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 SLC6A3Q01959 620 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 CACNB2Q08289 660 aaPredicted RBP12.74□□□□□ -0.37
UBR4-203ENST00000375225 PDE4CQ08493 712 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 BBS9Q3SYG4 887 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 NOTUMQ6P988 496 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 FAM183BPQ6ZVS7 135 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 ARCQ7LC44 396 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 PRUNE1Q86TP1 453 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 GLIS1Q8NBF1 620 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 FBXO36Q8NEA4 188 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 CXorf38Q8TB03 319 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 ZNF398Q8TD17 642 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 LRRC39Q96DD0 335 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 RNF157Q96PX1 679 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 TWNKQ96RR1 684 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 UPF3AQ9H1J1 476 aaKnown RBP12.74□□□□□ -0.37
UBR4-203ENST00000375225 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.74□□□□□ -0.37
UBR4-203ENST00000375225 RABGEF1Q9UJ41 708 aa12.74□□□□□ -0.37
UBR4-203ENST00000375225 BCLAF3A2AJT9 711 aaKnown RBP12.73□□□□□ -0.37
UBR4-203ENST00000375225 E5RJQ4 531 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 HNRNPCL1O60812 293 aaKnown RBP12.73□□□□□ -0.37
UBR4-203ENST00000375225 ZBED1O96006 694 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 MT-ND3P03897 115 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 INHBAP08476 426 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 IQCF3P0C7M6 154 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 GNAT1P11488 350 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 PRKAR2AP13861 404 aaKnown RBP12.73□□□□□ -0.37
UBR4-203ENST00000375225 EZRP15311 586 aaKnown RBP12.73□□□□□ -0.37
UBR4-203ENST00000375225 CREB1P16220 341 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 NR2C2P49116 596 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 BCAR1P56945 870 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 SLC8A3P57103 927 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 SARNPP82979 210 aaKnown RBP12.73□□□□□ -0.37
UBR4-203ENST00000375225 BEX3Q00994 111 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 RIPK1Q13546 671 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 ZKSCAN8Q15776 578 aaPredicted RBP12.73□□□□□ -0.37
UBR4-203ENST00000375225 PKN2Q16513 984 aaKnown RBP12.73□□□□□ -0.37
UBR4-203ENST00000375225 FAM133BQ5BKY9 247 aaKnown RBP12.73□□□□□ -0.37
UBR4-203ENST00000375225 SPDYAQ5MJ70 313 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 ARHGAP17Q68EM7 881 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 ANKMY2Q8IV38 441 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 TRIM42Q8IWZ5 723 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 ARFGAP1Q8N6T3 406 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 FAM71DQ8N9W8 422 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 PXYLP1Q8TE99 480 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms