RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 DDX23Q9BUQ8 820 aaKnown RBP10.15□□□□□ -0.78
PTPN20-202ENST00000374339 CARD6Q9BX69 1037 aa10.15□□□□□ -0.78
PTPN20-202ENST00000374339 COMMD8Q9NX08 183 aa10.15□□□□□ -0.78
PTPN20-202ENST00000374339 EHD2Q9NZN4 543 aa10.15□□□□□ -0.78
PTPN20-202ENST00000374339 USP3Q9Y6I4 520 aa10.15□□□□□ -0.78
PTPN20-202ENST00000374339 MKI67P46013 3256 aaKnown RBP10.15□□□□□ -0.78
PTPN20-202ENST00000374339 PLXNA3P51805 1871 aa10.15□□□□□ -0.79
PTPN20-202ENST00000374339 MYO16Q9Y6X6 1858 aa10.15□□□□□ -0.79
PTPN20-202ENST00000374339 WDR27A2RRH5 827 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 EFCAB8A8MWE9 144 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 C2CD2LO14523 706 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 TNFRSF10BO14763 440 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 CAPN9O14815 690 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 PRPSAP2O60256 369 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 LRCH4O75427 683 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 ABLIM3O94929 683 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 ZRANB2O95218 330 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 USP17L7P0C7H9 530 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 HAPLN1P10915 354 aaPredicted RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 CTNNB1P35222 781 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 BMPR1AP36894 532 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 MAGEA10P43363 369 aaPredicted RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 NDUFV1P49821 464 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 CDR1P51861 262 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 SLC5A3P53794 718 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 COPS2P61201 443 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 UBE3AQ05086 875 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 TAF5Q15542 800 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 SLC25A52Q3SY17 297 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 CCDC14Q49A88 953 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 DCAF6Q58WW2 860 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 BEND5Q7L4P6 421 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 STRADAQ7RTN6 431 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 GPRIN1Q7Z2K8 1008 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 NUP93Q8N1F7 819 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 RASGEF1CQ8N431 466 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 PDCD7Q8N8D1 485 aaKnown RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 KLHL23Q8NBE8 558 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 ATAD1Q8NBU5 361 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 EXD1Q8NHP7 514 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 MAIP1Q8WWC4 291 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 KRT35Q92764 455 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 KHSRPQ92945 711 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 CFAP57Q96MR6 1250 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 SAMD11Q96NU1 681 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 SLC2A13Q96QE2 648 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 SEPT5Q99719 369 aaPredicted RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 CLSTN3Q9BQT9 956 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 TMEM121BQ9BXQ6 578 aaPredicted RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 ZBP1Q9H171 429 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 AFF4Q9UHB7 1163 aaKnown RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 PLXNA4Q9HCM2 1894 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 GOLGA6L10A0A0M3HER8 536 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 YJEFN3A6XGL0 299 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 E7ENQ6 273 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 F9P00740 461 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 RB1P06400 928 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 LINC00271P0C7V0 271 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 CTSAP10619 480 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 ATF2P15336 505 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 RPL17P18621 184 aaKnown RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 GTF2F1P35269 517 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 MARCKSL1P49006 195 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 TAS2R40P59535 323 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 ATP11AP98196 1134 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 RAB33AQ14088 237 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 SMC1AQ14683 1233 aaKnown RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 MGAT5BQ3V5L5 792 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 BOLA3Q53S33 107 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 ZFYVE27Q5T4F4 411 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 DCAF12L1Q5VU92 463 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 CCDC70Q6NSX1 233 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 RSPO2Q6UXX9 243 aaPredicted RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 DENND5BQ6ZUT9 1274 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 MON1AQ86VX9 555 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 RCOR2Q8IZ40 523 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 FAM172AQ8WUF8 416 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 TEKT4Q8WW24 435 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 CENPIQ92674 756 aaPredicted RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 NT5C3BQ969T7 300 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 TBCBQ99426 244 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 C11orf84Q9BUA3 381 aaPredicted RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 RXFP1Q9HBX9 757 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 NGRNQ9NPE2 291 aaKnown RBP10.14□□□□□ -0.79
PTPN20-202ENST00000374339 ABCC13Q9NSE7 274 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 USP18Q9UMW8 372 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 SCML2Q9UQR0 700 aa10.14□□□□□ -0.79
PTPN20-202ENST00000374339 COL4A4P53420 1690 aaPredicted RBP10.13□□□□□ -0.79
PTPN20-202ENST00000374339 LINC01553A4QN01 128 aa10.13□□□□□ -0.79
PTPN20-202ENST00000374339 C5orf67F2Z3F1 127 aa10.13□□□□□ -0.79
PTPN20-202ENST00000374339 CCDC188H7C350 402 aa10.13□□□□□ -0.79
PTPN20-202ENST00000374339 ADAM12O43184 909 aa10.13□□□□□ -0.79
PTPN20-202ENST00000374339 LPXNO60711 386 aa10.13□□□□□ -0.79
PTPN20-202ENST00000374339 FGGP02679 453 aa10.13□□□□□ -0.79
PTPN20-202ENST00000374339 PYGMP11217 842 aa10.13□□□□□ -0.79
PTPN20-202ENST00000374339 NCAM1P13591 858 aa10.13□□□□□ -0.79
PTPN20-202ENST00000374339 DNAJB2P25686 324 aa10.13□□□□□ -0.79
PTPN20-202ENST00000374339 YWHAQP27348 245 aa10.13□□□□□ -0.79
PTPN20-202ENST00000374339 MIPP30301 263 aa10.13□□□□□ -0.79
PTPN20-202ENST00000374339 ELF1P32519 619 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms