RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 TRIM33Q9UPN9 1127 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 ASB3Q9Y575 518 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 SLC4A7Q9Y6M7 1214 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 CNTNAP2Q9UHC6 1331 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 TISP43B9A030 160 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 HNRNPDLO14979 420 aaKnown RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 CYP26A1O43174 497 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 EFCAB14O75071 495 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 SKAP2O75563 359 aaPredicted RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 SNUPNO95149 360 aaKnown RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 AMHP03971 560 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 T-ENOLP0DO92 83 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 BMP8BP34820 402 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 PCK1P35558 622 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 DLG4P78352 724 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 OCRLQ01968 901 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 ROR2Q01974 943 aaKnown RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 KCTD19Q17RG1 926 aaPredicted RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 FYB2Q5VWT5 728 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 KRT39Q6A163 491 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 SLC30A9Q6PML9 568 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 SLC24A5Q71RS6 500 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 MAP4K3Q8IVH8 894 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 KATNAL2Q8IYT4 538 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 DNAJC9Q8WXX5 260 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 DDX27Q96GQ7 796 aaKnown RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 KREMEN1Q96MU8 473 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 NT5C1BQ96P26 610 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 TRAPPC9Q96Q05 1148 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 TMEM117Q9H0C3 514 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 MTIF3Q9H2K0 278 aaKnown RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 MMADHCQ9H3L0 296 aaPredicted RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 TRABDQ9H4I3 376 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 PDZD7Q9H5P4 517 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 ANKFY1Q9P2R3 1169 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 NKX1-2Q9UD57 310 aaPredicted RBP11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 EXOC7Q9UPT5 735 aa11.97□□□□□ -0.49
TSPAN1-201ENST00000372003 SCN5AQ14524 2016 aa11.96□□□□□ -0.49
TSPAN1-201ENST00000372003 EXOC1LA0A1B0GW35 172 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 C9IYK1 514 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 CCDC22O60826 627 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 TROVE2P10155 538 aaKnown RBP eCLIP11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 UNGP13051 313 aaPredicted RBP11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 KLRC2P26717 231 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 ADSSP30520 456 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 ABCD1P33897 745 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 VHLP40337 213 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 GCLMP48507 274 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 BPIFB4P59827 614 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 UBXN11Q5T124 520 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 SLC27A1Q6PCB7 646 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 SLC47A2Q86VL8 602 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 RHOT1Q8IXI2 618 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 EXD1Q8NHP7 514 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 HELQQ8TDG4 1101 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 ALKBH8Q96BT7 664 aaKnown RBP11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 TSC22D3Q99576 134 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 ADPGKQ9BRR6 497 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 CCDC28BQ9BUN5 200 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 APOL6Q9BWW8 343 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 TMEM8AQ9HCN3 771 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 MLXIPLQ9NP71 852 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 C1orf112Q9NSG2 853 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 FAM105AQ9NUU6 356 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 HSPBP1Q9NZL4 362 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 HAO1Q9UJM8 370 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 ANAPC7Q9UJX3 599 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 LRFN2Q9ULH4 789 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 COLQQ9Y215 455 aaPredicted RBP11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 TNFSF13BQ9Y275 285 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 LRCH1Q9Y2L9 728 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 HES2Q9Y543 173 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 PCDHB7Q9Y5E2 793 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 PCDHB2Q9Y5E7 798 aa11.96□□□□□ -0.5
TSPAN1-201ENST00000372003 A0A0U1RQF3 1178 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 GRXCR1A8MXD5 290 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 DNALI1O14645 258 aaPredicted RBP11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 DNAJC6O75061 913 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 TOM1L1O75674 476 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 PROSCO94903 275 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 SKIP12755 728 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 TSHRP16473 764 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 RRM1P23921 792 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 TARSP26639 723 aaKnown RBP11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 PTDSS1P48651 473 aaKnown RBP11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 OSTNP61366 133 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 GCNT1Q02742 428 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 SNX1Q13596 522 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 TMED2Q15363 201 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 FAM91A1Q658Y4 838 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 CWF19L1Q69YN2 538 aaKnown RBP11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 SMYD5Q6GMV2 418 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 ZPBP2Q6X784 338 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 TRIM72Q6ZMU5 477 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 TDHQ8IZJ6 230 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 MCOLN2Q8IZK6 566 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 LPPQ93052 612 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 VCPIP1Q96JH7 1222 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms