RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 A8MXQ7 604 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 DYNC1LI2O43237 492 aaPredicted RBP30.15■■■□□ 2.42
SSBP3-204ENST00000371320 SMIM10L2AP0DMW4 78 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 SMIM10L2BP0DMW5 78 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 MSH2P43246 934 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 BCAR1P56945 870 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 SOWAHAQ2M3V2 549 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 C9orf57Q5W0N0 161 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 ZDHHC17Q8IUH5 632 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 PQLC3Q8N755 202 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 C7orf31Q8N865 590 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 PPP1R13LQ8WUF5 828 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 FAF2Q96CS3 445 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 SNRNP25Q9BV90 132 aaKnown RBP30.15■■■□□ 2.42
SSBP3-204ENST00000371320 B3GNT5Q9BYG0 378 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 NXF3Q9H4D5 531 aaKnown RBP30.15■■■□□ 2.42
SSBP3-204ENST00000371320 RNF19AQ9NV58 838 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 KLHL14Q9P2G3 628 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 SCN1AP35498 2009 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 GABBR2O75899 941 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 PIAS1O75925 651 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 GBP2P32456 591 aaPredicted RBP30.15■■■□□ 2.42
SSBP3-204ENST00000371320 KCNJ11Q14654 390 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 ARHGAP17Q68EM7 881 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 ALKAL1Q6UXT8 129 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 NPLOC4Q8TAT6 608 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 NCAPGQ9BPX3 1015 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 LPIN3Q9BQK8 851 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 APOL6Q9BWW8 343 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 SSU72Q9NP77 194 aaKnown RBP30.15■■■□□ 2.42
SSBP3-204ENST00000371320 CNTN3Q9P232 1028 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 PAK5Q9P286 719 aa30.15■■■□□ 2.42
SSBP3-204ENST00000371320 NRCAMQ92823 1304 aa30.14■■■□□ 2.42
SSBP3-204ENST00000371320 KCNN4O15554 427 aa30.14■■■□□ 2.42
SSBP3-204ENST00000371320 RECQL4O94761 1208 aa30.14■■■□□ 2.42
SSBP3-204ENST00000371320 DARSP14868 501 aaKnown RBP30.14■■■□□ 2.42
SSBP3-204ENST00000371320 ELK3P41970 407 aa30.14■■■□□ 2.42
SSBP3-204ENST00000371320 DNAJC3Q13217 504 aa30.14■■■□□ 2.42
SSBP3-204ENST00000371320 CA9Q16790 459 aa30.14■■■□□ 2.42
SSBP3-204ENST00000371320 HHATQ5VTY9 493 aa30.14■■■□□ 2.42
SSBP3-204ENST00000371320 PCDH19Q8TAB3 1148 aa30.14■■■□□ 2.42
SSBP3-204ENST00000371320 DPEP3Q9H4B8 488 aa30.14■■■□□ 2.42
SSBP3-204ENST00000371320 IQCA1LA6NCM1 817 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 CHADO15335 359 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 SLC1A5Q15758 541 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 PDK4Q16654 411 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 GALNTL6Q49A17 601 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 SYCP2LQ5T4T6 812 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 RGS9BPQ6ZS82 235 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 PNMA8AQ86V59 439 aaPredicted RBP30.13■■■□□ 2.41
SSBP3-204ENST00000371320 IGDCC3Q8IVU1 814 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 CCDC63Q8NA47 563 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 RAB6BQ9NRW1 208 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 GRID1Q9ULK0 1009 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 UBQLN1Q9UMX0 589 aaKnown RBP30.13■■■□□ 2.41
SSBP3-204ENST00000371320 CFAP69A5D8W1 941 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 MDM4O15151 490 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 CYP2C9P11712 490 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 AKAP5P24588 427 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 PCBP1Q15365 356 aaKnown RBP eCLIP30.13■■■□□ 2.411e-6■■■■□ 22.1
SSBP3-204ENST00000371320 SLC9A4Q6AI14 798 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 VSIG1Q86XK7 387 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 DCAKDQ8WVC6 231 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 CYTH2Q99418 400 aa30.13■■■□□ 2.41
SSBP3-204ENST00000371320 TRIP11Q15643 1979 aa30.12■■■□□ 2.41
SSBP3-204ENST00000371320 SMIM35A0A1B0GVV1 85 aa30.12■■■□□ 2.41
SSBP3-204ENST00000371320 HDAC4P56524 1084 aa30.12■■■□□ 2.41
SSBP3-204ENST00000371320 RNF43Q68DV7 783 aa30.12■■■□□ 2.41
SSBP3-204ENST00000371320 PARP9Q8IXQ6 854 aa30.12■■■□□ 2.41
SSBP3-204ENST00000371320 PARK7Q99497 189 aaKnown RBP30.12■■■□□ 2.41
SSBP3-204ENST00000371320 ZNF670Q9BS34 389 aa30.12■■■□□ 2.41
SSBP3-204ENST00000371320 RXFP1Q9HBX9 757 aa30.12■■■□□ 2.41
SSBP3-204ENST00000371320 STARD13Q9Y3M8 1113 aa30.12■■■□□ 2.41
SSBP3-204ENST00000371320 A6NJR5 290 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 HCRTO43612 131 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 ZWINTO95229 277 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 ZBED1O96006 694 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 PDGFRBP09619 1106 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 MNAT1P51948 309 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 PPP6R3Q5H9R7 873 aaPredicted RBP30.11■■■□□ 2.41
SSBP3-204ENST00000371320 ICE2Q659A1 982 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 LRRC8CQ8TDW0 803 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 RTP4Q96DX8 246 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 RMDN2Q96LZ7 410 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 PHTF1Q9UMS5 762 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 RBL1P28749 1068 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 FAM110CQ1W6H9 321 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 FBXO47Q5MNV8 452 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 SPOCK2Q92563 424 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 TEX264Q9Y6I9 313 aa30.11■■■□□ 2.41
SSBP3-204ENST00000371320 F2P00734 622 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 CCDC130P13994 396 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 ADORA2BP29275 332 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 BST2Q10589 180 aaKnown RBP30.1■■■□□ 2.41
SSBP3-204ENST00000371320 LVRNQ6Q4G3 990 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 FITM2Q8N6M3 262 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 ANKRD52Q8NB46 1076 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 MZB1Q8WU39 189 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 ECT2Q9H8V3 914 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 GJD2Q9UKL4 321 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms