RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MYLK2Q9H1R3 596 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 KIAA1586Q9HCI6 787 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 CYLDQ9NQC7 956 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 RAB20Q9NX57 234 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 ZFATQ9P243 1243 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 RWDD3Q9Y3V2 267 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 PCDHB2Q9Y5E7 798 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 PLXNA4Q9HCM2 1894 aa12.06□□□□□ -0.48
USF1-201ENST00000368019 RRN3P2A6NIE6 340 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 CHMP2AO43633 222 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 AHCYL1O43865 530 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 NPTXRO95502 500 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 RPLP2P05387 115 aaKnown RBP12.05□□□□□ -0.48
USF1-201ENST00000368019 TPBGLP0DKB5 382 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 ARP10275 920 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 RRM1P23921 792 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 QARSP47897 775 aaKnown RBP12.05□□□□□ -0.48
USF1-201ENST00000368019 HYAL1Q12794 435 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 ZRSR2Q15696 482 aaKnown RBP12.05□□□□□ -0.48
USF1-201ENST00000368019 SNRNP35Q16560 246 aaKnown RBP12.05□□□□□ -0.48
USF1-201ENST00000368019 EFHC2Q5JST6 749 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 C15orf39Q6ZRI6 1047 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 MON1BQ7L1V2 547 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 OTUD6AQ7L8S5 288 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 PCGF5Q86SE9 256 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 PHF13Q86YI8 300 aaPredicted RBP12.05□□□□□ -0.48
USF1-201ENST00000368019 SRRM1Q8IYB3 904 aaKnown RBP12.05□□□□□ -0.48
USF1-201ENST00000368019 RCOR2Q8IZ40 523 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 CYP4X1Q8N118 509 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 GDAP1Q8TB36 358 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 ASAP3Q8TDY4 903 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 SMC6Q96SB8 1091 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 NTPCRQ9BSD7 190 aaKnown RBP12.05□□□□□ -0.48
USF1-201ENST00000368019 OSBPL8Q9BZF1 889 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 MMADHCQ9H3L0 296 aaPredicted RBP12.05□□□□□ -0.48
USF1-201ENST00000368019 TRABDQ9H4I3 376 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 DCLRE1BQ9H816 532 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 KCNH7Q9NS40 1196 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 TBC1D22BQ9NU19 505 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 CLDND1Q9NY35 253 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 PKD2L1Q9P0L9 805 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 PHTF1Q9UMS5 762 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 CHKBQ9Y259 395 aa12.05□□□□□ -0.48
USF1-201ENST00000368019 TECTAO75443 2155 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 EXOC1LA0A1B0GW35 172 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 ALOX15BO15296 676 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 TM9SF1O15321 606 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
USF1-201ENST00000368019 DKC1O60832 514 aaKnown RBP eCLIP12.04□□□□□ -0.48
USF1-201ENST00000368019 FAM155BO75949 473 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 ATG7O95352 703 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 FESP07332 822 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 CD52P31358 61 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 SFNP31947 248 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 SSTR3P32745 418 aaPredicted RBP12.04□□□□□ -0.48
USF1-201ENST00000368019 JAK3P52333 1124 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 CLDN10P78369 228 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 C1QBPQ07021 282 aaKnown RBP12.04□□□□□ -0.48
USF1-201ENST00000368019 DLX2Q07687 328 aaPredicted RBP12.04□□□□□ -0.48
USF1-201ENST00000368019 BTG3Q14201 252 aaPredicted RBP12.04□□□□□ -0.48
USF1-201ENST00000368019 FYB2Q5VWT5 728 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 IER5Q5VY09 327 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 PLEKHA7Q6IQ23 1121 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 PLPPR4Q7Z2D5 763 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 ADHFE1Q8IWW8 467 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 KIF2BQ8N4N8 673 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 RDH13Q8NBN7 331 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 FAM13CQ8NE31 585 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 LRRC8CQ8TDW0 803 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 PRCCQ92733 491 aaPredicted RBP12.04□□□□□ -0.48
USF1-201ENST00000368019 SEMA4DQ92854 862 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 SLC7A6OSQ96CW6 309 aaPredicted RBP12.04□□□□□ -0.48
USF1-201ENST00000368019 ERP27Q96DN0 273 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 SPDL1Q96EA4 605 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 RBM15Q96T37 977 aaKnown RBP eCLIP12.04□□□□□ -0.48
USF1-201ENST00000368019 POP1Q99575 1024 aaKnown RBP12.04□□□□□ -0.48
USF1-201ENST00000368019 PCIF1Q9H4Z3 704 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 JPH1Q9HDC5 661 aaPredicted RBP12.04□□□□□ -0.48
USF1-201ENST00000368019 SPATS2LQ9NUQ6 558 aaKnown RBP12.04□□□□□ -0.48
USF1-201ENST00000368019 STOML1Q9UBI4 398 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 SLC9A2Q9UBY0 812 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 CNTN6Q9UQ52 1028 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 FAM50BQ9Y247 325 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 EFR3BQ9Y2G0 817 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 STK38LQ9Y2H1 464 aa12.04□□□□□ -0.48
USF1-201ENST00000368019 IGKV6D-21A0A0A0MT36 114 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 ZBTB39O15060 712 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 DHX15O43143 795 aaKnown RBP12.03□□□□□ -0.48
USF1-201ENST00000368019 DCXO43602 365 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 TYROBPO43914 113 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 DNAJC6O75061 913 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 TGDSO95455 350 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 ATP5BP06576 529 aaKnown RBP12.03□□□□□ -0.48
USF1-201ENST00000368019 TROVE2P10155 538 aaKnown RBP eCLIP12.03□□□□□ -0.48
USF1-201ENST00000368019 RALAP11233 206 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 GCAP28676 217 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 PHBP35232 272 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 NSFP46459 744 aaKnown RBP12.03□□□□□ -0.48
USF1-201ENST00000368019 ACTR2P61160 394 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 IGBP1P78318 339 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms