RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TRMT6Q9UJA5 497 aaKnown RBP12.43□□□□□ -0.42
CDC42BPA-203ENST00000366766 RIPK2O43353 540 aa12.43□□□□□ -0.42
CDC42BPA-203ENST00000366766 SREBF2Q12772 1141 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 SPDYAQ5MJ70 313 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 TMPRSS6Q8IU80 811 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 ATG4CQ96DT6 458 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 TMEM176AQ96HP8 235 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 ALG13Q9NP73 1137 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 TRPC1P48995 793 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 ZNF844Q08AG5 666 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 SCARA3Q6AZY7 606 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 SZRD1Q7Z422 152 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 DDIT4Q9NX09 232 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 TMCO1Q9UM00 188 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 ALADP13716 330 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 VCAM1P19320 739 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 SLC12A3P55017 1021 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 KCNMA1Q12791 1236 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 THEMIS2Q5TEJ8 643 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 CRELD2Q6UXH1 353 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 IPMKQ8NFU5 416 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 APOC4-APOC2K7ER74 178 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 SYF2O95926 243 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 APOC2P02655 101 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 CRABP2P29373 138 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 OXCT1P55809 520 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 SLC47A2Q86VL8 602 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 PI4K2AQ9BTU6 479 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 ADGRE3Q9BY15 652 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 EIF3LQ9Y262 564 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 SCN11AQ9UI33 1791 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 CLUHO75153 1309 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 RPL10AP62906 217 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 TWF1Q12792 350 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 ZBTB41Q5SVQ8 909 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 BBS7Q8IWZ6 715 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 CINPQ9BW66 212 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 UBXN6Q9BZV1 441 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 MUC3BQ9H195 1237 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 AAASQ9NRG9 546 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 DDX20Q9UHI6 824 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 ACOT9Q9Y305 439 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 M0R3G1 203 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 RGS2P41220 211 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 NCKAP1LP55160 1127 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 TMEM154Q6P9G4 183 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 KYQ8NBH2 561 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 CYGBQ8WWM9 190 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 MTMR8Q96EF0 704 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 EMILIN2Q9BXX0 1053 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 RMND5AQ9H871 391 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 HEY2Q9UBP5 337 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 C15orf38-AP3S2A0A0A6YYH1 394 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 CYP2C18P33260 490 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 DMC1Q14565 340 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 BMT2Q1RMZ1 405 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 ARPINQ7Z6K5 226 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 CPNE1Q99829 537 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 PACSIN1Q9BY11 444 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 PRRG3Q9BZD7 231 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 MYH7BA7E2Y1 1941 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 SERPINE1P05121 402 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 SLC20A2Q08357 652 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 SFSWAPQ12872 951 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 RASA2Q15283 850 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 TDRD10Q5VZ19 366 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 TTC33Q6PID6 262 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 DLG3Q92796 817 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 FBXO44Q9H4M3 255 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 GIMAP4Q9NUV9 329 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 VANGL2Q9ULK5 521 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 HEATR9A2RTY3 570 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 KBTBD13C9JR72 458 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 TARSP26639 723 aaKnown RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 ATP6V1E1P36543 226 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 MAGED4Q96JG8 741 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 KRCC1Q9NPI7 259 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 ZC4H2Q9NQZ6 224 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 GGA3Q9NZ52 723 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 AP4E1Q9UPM8 1137 aa12.42□□□□□ -0.42
CDC42BPA-203ENST00000366766 C17orf102A2RUQ5 167 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 PDGFRBP09619 1106 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 IRAK4Q9NWZ3 460 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 RIC1Q4ADV7 1423 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 SGPL1O95470 568 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 PKN2Q16513 984 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 DCLK3Q9C098 648 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 ZFYVE28Q9HCC9 887 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 IL17RBQ9NRM6 502 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 SPANXN3Q5MJ09 141 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 OTOP1Q7RTM1 612 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 ADCK1Q86TW2 530 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 GEMIN8Q9NWZ8 242 aaKnown RBP12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 A0A0G2JLW4 131 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 BNIP3LO60238 219 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 ERBB2P04626 1255 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 NUDT2P50583 147 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 RENBPP51606 427 aa12.41□□□□□ -0.42
CDC42BPA-203ENST00000366766 MAD2L1Q13257 205 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms