RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 SDCBP2Q9H190 292 aa8.7□□□□□ -1.02
MRPL55-211ENST00000366738 GANQ9H2C0 597 aa8.7□□□□□ -1.02
MRPL55-211ENST00000366738 SMYD3Q9H7B4 428 aa8.7□□□□□ -1.02
MRPL55-211ENST00000366738 IL21Q9HBE4 155 aa8.7□□□□□ -1.02
MRPL55-211ENST00000366738 TMLHEQ9NVH6 421 aa8.7□□□□□ -1.02
MRPL55-211ENST00000366738 FHOD1Q9Y613 1164 aa8.7□□□□□ -1.02
MRPL55-211ENST00000366738 ABCA7Q8IZY2 2146 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 NUP210Q8TEM1 1887 aaPredicted RBP8.69□□□□□ -1.02
MRPL55-211ENST00000366738 NOL4O94818 638 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 ADCY5O95622 1261 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 ODC1P11926 461 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 GABRR2P28476 465 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 ASPAP45381 313 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 TAF6P49848 677 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 RBP5P82980 135 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 CYP4F8P98187 520 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 SLC39A12Q504Y0 691 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 DAB2IPQ5VWQ8 1189 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 WSCD1Q658N2 575 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 RRAGAQ7L523 313 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 TMEM150AQ86TG1 271 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 VSTM4Q8IW00 320 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 SYNPOQ8N3V7 929 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 LRRC52Q8N7C0 313 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 LEMD2Q8NC56 503 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 EHBP1Q8NDI1 1231 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 DEFB124Q8NES8 71 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 RIN3Q8TB24 985 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 E2F7Q96AV8 911 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 HPDLQ96IR7 371 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 ZC3H10Q96K80 434 aaKnown RBP8.69□□□□□ -1.02
MRPL55-211ENST00000366738 ZNF560Q96MR9 790 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 OXCT2Q9BYC2 517 aaPredicted RBP8.69□□□□□ -1.02
MRPL55-211ENST00000366738 TTYH3Q9C0H2 523 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 ZCWPW1Q9H0M4 648 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 DUSP15Q9H1R2 295 aaPredicted RBP8.69□□□□□ -1.02
MRPL55-211ENST00000366738 FAM207AQ9NSI2 230 aaPredicted RBP8.69□□□□□ -1.02
MRPL55-211ENST00000366738 KLK13Q9UKR3 277 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 SLC8A2Q9UPR5 921 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 NUP205Q92621 2012 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 CFAP46Q8IYW2 2715 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 GON4LQ3T8J9 2241 aa8.69□□□□□ -1.02
MRPL55-211ENST00000366738 KALRNO60229 2985 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 CCDC163A0A0D9SF12 145 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 A0A1W2PQC6 194 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 OTOL1A6NHN0 477 aaPredicted RBP8.68□□□□□ -1.02
MRPL55-211ENST00000366738 PATE3B3GLJ2 98 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 RNF225M0QZC1 329 aaPredicted RBP8.68□□□□□ -1.02
MRPL55-211ENST00000366738 CYB561D2O14569 222 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 CBFA2T2O43439 604 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 HCRTO43612 131 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
MRPL55-211ENST00000366738 PNMA6AP0CW24 399 aaPredicted RBP8.68□□□□□ -1.02
MRPL55-211ENST00000366738 HMGA1P17096 107 aaKnown RBP8.68□□□□□ -1.02
MRPL55-211ENST00000366738 ALDH1A3P47895 512 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 GPR15P49685 360 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 EPHB3P54753 998 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 GOLGA8FQ08AF8 430 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 GOLGA8DPQ0D2H9 430 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 UAP1L1Q3KQV9 507 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 WDR72Q3MJ13 1102 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 ARHGAP29Q52LW3 1261 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 SOWAHCQ53LP3 525 aaPredicted RBP8.68□□□□□ -1.02
MRPL55-211ENST00000366738 KLHDC7AQ5VTJ3 777 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 FSTL4Q6MZW2 842 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 C19orf48Q6RUI8 117 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 TMC6Q7Z403 805 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 GIPC2Q8TF65 315 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 MRFAP1L1Q96HT8 127 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 PCMTD1Q96MG8 357 aaPredicted RBP8.68□□□□□ -1.02
MRPL55-211ENST00000366738 KREMEN1Q96MU8 473 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 NT5C1BQ96P26 610 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 SEPT5Q99719 369 aaPredicted RBP8.68□□□□□ -1.02
MRPL55-211ENST00000366738 SLC46A2Q9BY10 475 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 GPR88Q9GZN0 384 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 NIF3L1Q9GZT8 377 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 VRTNQ9H8Y1 702 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 TMEM9BQ9NQ34 198 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 NXF1Q9UBU9 619 aaKnown RBP8.68□□□□□ -1.02
MRPL55-211ENST00000366738 APEX2Q9UBZ4 518 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 HMGXB4Q9UGU5 601 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 L1RE1Q9UN81 338 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 NME7Q9Y5B8 376 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 SNX9Q9Y5X1 595 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 ITIH6Q6UXX5 1313 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 ADAMTS20P59510 1910 aa8.68□□□□□ -1.02
MRPL55-211ENST00000366738 BCLAF3A2AJT9 711 aaKnown RBP8.67□□□□□ -1.02
MRPL55-211ENST00000366738 PCNX2A6NKB5 2137 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 KPNA7A9QM74 516 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 DPYSL4O14531 572 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 CDX4O14627 284 aaPredicted RBP8.67□□□□□ -1.02
MRPL55-211ENST00000366738 OBSL1O75147 1896 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 RNF40O75150 1001 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 EGFP01133 1207 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 GYPCP04921 128 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 CEACAM1P13688 526 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 UCHL3P15374 230 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 CSRP1P21291 193 aaKnown RBP8.67□□□□□ -1.02
MRPL55-211ENST00000366738 ATICP31939 592 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms