RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 OSER1Q9NX31 292 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TBC1D14Q9P2M4 693 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SCML2Q9UQR0 700 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 EML5Q05BV3 1969 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 STX10O60499 249 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 LRP3O75074 770 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CLSTN1O94985 981 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SMC2O95347 1197 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 RETP07949 1114 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 EPB41P11171 864 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CD58P19256 250 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 BMP6P22004 513 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SLC6A11P48066 632 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 KIF11P52732 1056 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 FOXK2Q01167 660 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 LRRC63Q05C16 580 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 LPAL2Q16609 132 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ERMP1Q7Z2K6 904 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PHTF2Q8N3S3 785 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ZNF276Q8N554 614 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SLC4A11Q8NBS3 891 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 USP33Q8TEY7 942 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 GAB3Q8WWW8 586 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SECISBP2LQ93073 1101 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TATDN2Q93075 761 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SMARCE1Q969G3 411 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SLC35C1Q96A29 364 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 KLF16Q9BXK1 252 aaPredicted RBP14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 DUSP16Q9BY84 665 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 NMUR1Q9HB89 426 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TLR8Q9NR97 1041 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CISHQ9NSE2 258 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 EBF1Q9UH73 591 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SLC8A2Q9UPR5 921 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 USP3Q9Y6I4 520 aa14.44□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TRIM49BA6NDI0 452 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SCAMP3O14828 347 aaKnown RBP14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TLR5O60602 858 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TBX18O95935 607 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CD44P16070 742 aaKnown RBP14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PXNP49023 591 aaPredicted RBP14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 RAD23BP54727 409 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 HTR3DQ70Z44 454 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 C12orf40Q86WS4 652 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SFTPA1Q8IWL2 248 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ETFBKMTQ8IXQ9 262 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TTC39CQ8N584 583 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CCDC150Q8NCX0 1101 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ARID3AQ99856 593 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 UBXN6Q9BZV1 441 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 GMEB2Q9UKD1 530 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 RAB23Q9ULC3 237 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 MYH10P35580 1976 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 MYOFQ9NZM1 2061 aa14.43□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PMM2O15305 246 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CYP26A1O43174 497 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TRIM21P19474 475 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ACO1P21399 889 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 DMC1Q14565 340 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 LY6G5CQ5SRR4 150 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ARHGAP17Q68EM7 881 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 KLHDC10Q6PID8 442 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 FOXR2Q6PJQ5 311 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PRR23BQ6ZRT6 265 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CCDC186Q7Z3E2 898 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SCD5Q86SK9 330 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 BBS7Q8IWZ6 715 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 FAM160A2Q8N612 972 aaPredicted RBP14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 UBR7Q8N806 425 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CCDC26Q8TAB7 109 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ACDQ96AP0 544 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TMEM176AQ96HP8 235 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 DHTKD1Q96HY7 919 aaPredicted RBP14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ZC3H10Q96K80 434 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TSG101Q99816 390 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 MAN1B1Q9UKM7 699 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 LAMA1P25391 3075 aa14.42□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PPP1R3GB7ZBB8 358 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 HOXC11O43248 304 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ADH1CP00326 375 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ADH5P11766 374 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ATP5C1P36542 298 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 KIR2DL1P43626 348 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 MRPS21P82921 87 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SPEM2Q0P670 501 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PUM1Q14671 1186 aaKnown RBP eCLIP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 RSPO4Q2I0M5 234 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ZNF394Q53GI3 561 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 RAB41Q5JT25 222 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TTI2Q6NXR4 508 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 RASSF3Q86WH2 238 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 HEXIM2Q96MH2 286 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 HHIPQ96QV1 700 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PNKPQ96T60 521 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SPHK2Q9NRA0 654 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ARMCX3Q9UH62 379 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 HOOK1Q9UJC3 728 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 MMP17Q9ULZ9 603 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SH3BP1Q9Y3L3 701 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms