RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 USP18Q9UMW8 372 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 KPNA3O00505 521 aaPredicted RBP11.31□□□□□ -0.6
CLIP1-203ENST00000361654 TIMM44O43615 452 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 NPY2RP49146 381 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 SCNN1BP51168 640 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 TKTL1P51854 596 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 POLE2P56282 527 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 GNA13Q14344 377 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 SMTNL2Q2TAL5 461 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 ALFQ53S48 1182 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 AGPAT3Q9NRZ7 376 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 KRT84Q9NSB2 600 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 GTF2A1LQ9UNN4 478 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
CLIP1-203ENST00000361654 OPLAHO14841 1288 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 RAMP2O60895 175 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 GLP2RO95838 553 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 PCNAP12004 261 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 ATAD3BQ5T9A4 648 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 FBXL19Q6PCT2 694 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 NLRP9Q7RTR0 991 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 FTHL17Q9BXU8 183 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 MIEF1Q9NQG6 463 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 PADI4Q9UM07 663 aa11.31□□□□□ -0.6
CLIP1-203ENST00000361654 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 AMD1P17707 334 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 RRM1P23921 792 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 MRPL28Q13084 256 aaKnown RBP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 XRCC4Q13426 336 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ACAD10Q6JQN1 1059 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 C4orf19Q8IY42 314 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ABTB1Q969K4 478 aaPredicted RBP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 SMARCD1Q96GM5 515 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 SGSM3Q96HU1 749 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 PDCD2LQ9BRP1 358 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ASCC2Q9H1I8 757 aaPredicted RBP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 GANQ9H2C0 597 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 GTF3C4Q9UKN8 822 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ADCY6O43306 1168 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ADH1AP07327 375 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 CCDC159P0C7I6 412 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 FGFR4P22455 802 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 S100A5P33763 92 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ERVK-9P63128 1117 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ERVK-24P63145 666 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 MARC1Q5VT66 337 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 C3orf62Q6ZUJ4 267 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 DAGLBQ8NCG7 672 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 MAGEC3Q8TD91 643 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ZNF333Q96JL9 665 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 CAB39Q9Y376 341 aaPredicted RBP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 IGF2BP3O00425 579 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 TEX33O43247 280 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 PGM1P36871 562 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 FKBP1BP68106 108 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 LAMTOR4Q0VGL1 99 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 TMED1Q13445 227 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 KIAA1324Q6UXG2 1013 aaKnown RBP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 FAM71DQ8N9W8 422 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 REPS2Q8NFH8 660 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 HPS3Q969F9 1004 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ATP6V1G3Q96LB4 118 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 THUMPD3Q9BV44 507 aaKnown RBP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 KCTD10Q9H3F6 313 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ELOVL6Q9H5J4 265 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 LRRC40Q9H9A6 602 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 SLC28A3Q9HAS3 691 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ETNK1Q9HBU6 452 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ALG13Q9NP73 1137 aaKnown RBP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 IMPAD1Q9NX62 359 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 TECPR2O15040 1411 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 TRAV19A0A0A6YYK7 116 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 C1QTNF3-AMACRE9PGA6 284 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 H3BMM5 538 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 M0R3G1 203 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 HS6ST1O60243 411 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 PLA2G6O60733 806 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 SREBF1P36956 1147 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 RPS7P62081 194 aaKnown RBP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 NFIAQ12857 509 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 POMGNT2Q8NAT1 580 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ZSCAN18Q8TBC5 510 aaPredicted RBP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 VPS33AQ96AX1 596 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 REPS1Q96D71 796 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 SMPD4Q9NXE4 827 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 RPS6KL1Q9Y6S9 549 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ESYT3A0FGR9 886 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 PSTPIP1O43586 416 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 GUCY1B2O75343 617 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 SUPT7LO94864 414 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 OR56A5P0C7T3 313 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 COMTP21964 271 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 PAX3P23760 479 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 NPTX2P47972 431 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ILDR2Q71H61 639 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 PLD3Q8IV08 490 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 RIBC1Q8N443 379 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms