RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 GNSP15586 552 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 YWHAQP27348 245 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 TXLNAP40222 546 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 SCAPQ12770 1279 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 SF3A1Q15459 793 aaKnown RBP14.72□□□□□ -0.05
VPS29-201ENST00000360579 HECTD3Q5T447 861 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 SYCP2LQ5T4T6 812 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 RRAGBQ5VZM2 374 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 NUP93Q8N1F7 819 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 DEFB119Q8N690 84 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 TRIML1Q8N9V2 468 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 FOXJ1Q92949 421 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 DNAJC19Q96DA6 116 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 FAM84AQ96KN4 292 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 HSPA12BQ96MM6 686 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 ZDHHC5Q9C0B5 715 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 PCIF1Q9H4Z3 704 aa14.72□□□□□ -0.05
VPS29-201ENST00000360579 CCDC86Q9H6F5 360 aaKnown RBP14.72□□□□□ -0.05
VPS29-201ENST00000360579 LOC400499M0QZD8 3231 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 PI4KAP42356 2102 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 PRPF6O94906 941 aaKnown RBP14.71□□□□□ -0.05
VPS29-201ENST00000360579 FTH1P19P0C7X4 201 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 IDEP14735 1019 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 PTPN1P18031 435 aaKnown RBP14.71□□□□□ -0.05
VPS29-201ENST00000360579 TUBP50607 506 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 CASP5P51878 434 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 ANO4Q32M45 955 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 PLEKHG6Q3KR16 790 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 WDR45BQ5MNZ6 344 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 STXBP4Q6ZWJ1 553 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 WDR49Q8IV35 697 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 CHPFQ8IZ52 775 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 RGL4Q8IZJ4 473 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 NAT16Q8N8M0 369 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 OR5B17Q8NGF7 314 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 OR6B3Q8NGW1 331 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 FBXO32Q969P5 355 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 ZNF419Q96HQ0 510 aaPredicted RBP14.71□□□□□ -0.05
VPS29-201ENST00000360579 EPSTI1Q96J88 318 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 KIAA1586Q9HCI6 787 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 SPHK2Q9NRA0 654 aa14.71□□□□□ -0.05
VPS29-201ENST00000360579 APOBEC2Q9Y235 224 aaKnown RBP14.71□□□□□ -0.05
VPS29-201ENST00000360579 ATP8B3O60423 1300 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 A0A1W2PQF6 199 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 FRMD3A2A2Y4 597 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 COCHO43405 550 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 SH3BP5O60239 455 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 NDUFS2O75306 463 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 GJB3O75712 270 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 TNNC1P63316 161 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 IFRD2Q12894 506 aaPredicted RBP14.7□□□□□ -0.06
VPS29-201ENST00000360579 RABEP1Q15276 862 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 SNX30Q5VWJ9 437 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 GRAMD4Q6IC98 578 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 CCNI2Q6ZMN8 369 aaPredicted RBP14.7□□□□□ -0.06
VPS29-201ENST00000360579 PDZD3Q86UT5 571 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 SLC41A1Q8IVJ1 513 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 NAXDQ8IW45 347 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 ZFRQ96KR1 1074 aaKnown RBP14.7□□□□□ -0.06
VPS29-201ENST00000360579 XPO6Q96QU8 1125 aaKnown RBP14.7□□□□□ -0.06
VPS29-201ENST00000360579 MRPL45Q9BRJ2 306 aaKnown RBP14.7□□□□□ -0.06
VPS29-201ENST00000360579 NACA2Q9H009 215 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 CYP8B1Q9UNU6 501 aa14.7□□□□□ -0.06
VPS29-201ENST00000360579 PTPRJQ12913 1337 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 PCDH15Q96QU1 1955 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 NDUFV2P19404 249 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 LARP1BQ659C4 914 aaKnown RBP14.69□□□□□ -0.06
VPS29-201ENST00000360579 C19orf48Q6RUI8 117 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 CCDC73Q6ZRK6 1079 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 USP49Q70CQ1 688 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 TRAPPC11Q7Z392 1133 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 BBS7Q8IWZ6 715 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 B3GALNT2Q8NCR0 500 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 OR2I1PQ8NGU4 316 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 IPO4Q8TEX9 1081 aaKnown RBP14.69□□□□□ -0.06
VPS29-201ENST00000360579 SCFD1Q8WVM8 642 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 TMX3Q96JJ7 454 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 GABRG3Q99928 467 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 ZNF518BQ9C0D4 1074 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 PANK4Q9NVE7 773 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 COMMD8Q9NX08 183 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 SMC3Q9UQE7 1217 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 NFE2L3Q9Y4A8 694 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 IGSF10Q6WRI0 2623 aa14.69□□□□□ -0.06
VPS29-201ENST00000360579 GCN1Q92616 2671 aaKnown RBP14.68□□□□□ -0.06
VPS29-201ENST00000360579 A8MXQ7 604 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 GFRA2O00451 464 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 WASP42768 502 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 CACNA2D1P54289 1103 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 COL28A1Q2UY09 1125 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 WDR72Q3MJ13 1102 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 SOWAHCQ53LP3 525 aaPredicted RBP14.68□□□□□ -0.06
VPS29-201ENST00000360579 EGFLAMQ63HQ2 1017 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 GLRX5Q86SX6 157 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 TMEM25Q86YD3 366 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 MIB1Q86YT6 1006 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 CBWD2Q8IUF1 395 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 CAMK1GQ96NX5 476 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 PLSCR2Q9NRY7 297 aa14.68□□□□□ -0.06
VPS29-201ENST00000360579 TMEM30AQ9NV96 361 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms