RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ACADLP28330 430 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 AQP5P55064 265 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 EPS8Q12929 822 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 PDIA6Q15084 440 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 USPL1Q5W0Q7 1092 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 SPATA18Q8TC71 538 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 ATP6V1HQ9UI12 483 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 AGO2Q9UKV8 859 aaKnown RBP13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 MEI4A8MW99 385 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 POTECB2RU33 542 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 USP17L10C9JJH3 530 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 FASP25445 335 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 RXRBP28702 533 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 GUF1Q8N442 669 aaKnown RBP13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 SPIRE2Q8WWL2 714 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 PIM2Q9P1W9 311 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 KDM6AO15550 1401 aaPredicted RBP13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 KPNA1P52294 538 aaPredicted RBP13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 ALFQ53S48 1182 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 KBTBD2Q8IY47 623 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 TCAIMQ8N3R3 496 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 POP5Q969H6 163 aaKnown RBP13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 GTF2A1LQ9UNN4 478 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 HOXC6P09630 235 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 RAD23AP54725 363 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 DYNLL1P63167 89 aaKnown RBP13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 UTS2BQ765I0 119 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 ZNF554Q86TJ5 538 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 ZNF677Q86XU0 584 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 FAM118BQ9BPY3 351 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 TMEM117Q9H0C3 514 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 RSAD1Q9HA92 442 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 SSU72P8A0A1W2PR75 194 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 H7C4K7 107 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 OXCT1P55809 520 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 ARF5P84085 180 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 TXNRD1Q16881 649 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 CCDC3Q9BQI4 270 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 TAF5Q15542 800 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 TBCELQ5QJ74 424 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 SNRNP48Q6IEG0 339 aaKnown RBP13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 GLB1LQ6UWU2 654 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 EEPD1Q7L9B9 569 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 OR6Y1Q8NGX8 325 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 KCTD14Q9BQ13 255 aaPredicted RBP13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 BDH2Q9BUT1 245 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 ABI2Q9NYB9 513 aaPredicted RBP13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 ATP7BP35670 1465 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 GALNTL6Q49A17 601 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 MZT2BQ6NZ67 158 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 CPA5Q8WXQ8 436 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 CITED4Q96RK1 184 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 BTBD10Q9BSF8 475 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 POLR3FQ9H1D9 316 aaPredicted RBP13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 CDK12Q9NYV4 1490 aaPredicted RBP13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 PRKAB2O43741 272 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 EGFRP00533 1210 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 SEL1L3Q68CR1 1132 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 EHD3Q9NZN3 535 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 A0A087WXM4 84 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 S100A1P23297 94 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 PTPN7P35236 360 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 RPL19P84098 196 aaKnown RBP13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 MRNIPQ6NTE8 343 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 PLEKHG4BQ96PX9 1271 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 RACGAP1Q9H0H5 632 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 MAPRE3Q9UPY8 281 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 SH3GLB1Q9Y371 365 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 FAM220BPB1ANY3 271 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 SLC16A4O15374 487 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 CDC40O60508 579 aaKnown RBP eCLIP13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 ZNF682O95780 498 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 RAG1P15918 1043 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 SRP54P61011 504 aaKnown RBP13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 RAB2AP61019 212 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 IL31Q6EBC2 164 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 PPIL6Q8IXY8 311 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 ULK2Q8IYT8 1036 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 VMP1Q96GC9 406 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 TRMT6Q9UJA5 497 aaKnown RBP13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 AP3M1Q9Y2T2 418 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 LRRC14BA6NHZ5 514 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 MYL4P12829 197 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 CDK8P49336 464 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 STARP49675 285 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 EPHX4Q8IUS5 362 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 TC2NQ8N9U0 490 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 MCEEQ96PE7 176 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 PTGES3LE9PB15 166 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 HOXA2O43364 376 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 GSTM1P09488 218 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 SRGNP10124 158 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 LCP1P13796 627 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 PDPK2PQ6A1A2 396 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 BRINP3Q76B58 766 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 SUN5Q8TC36 379 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 OSBP2Q969R2 916 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 HBS1LQ9Y450 684 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms