RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 IGLV3-22A0A075B6J6 115 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 TMEM221A6NGB7 291 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
UBAP1-202ENST00000359544 PSMD10O75832 226 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 TNFAIP8O95379 198 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 SERPINB6P35237 376 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 GRAMD1BQ3KR37 738 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 HSF5Q4G112 596 aaPredicted RBP15.5■□□□□ 0.07
UBAP1-202ENST00000359544 FNBP1LQ5T0N5 605 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 TMC7Q7Z402 723 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 FBXO11Q86XK2 927 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 SIKE1Q9BRV8 207 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 LZTS1Q9Y250 596 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 PTPN7P35236 360 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 NCKAP1LP55160 1127 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 GCNT1Q02742 428 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 BST1Q10588 318 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 SH2D5Q6ZV89 423 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 DAW1Q8N136 415 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 AHI1Q8N157 1196 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 PDIK1LQ8N165 341 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 SLC44A1Q8WWI5 657 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 SRPK1Q96SB4 655 aaKnown RBP15.5■□□□□ 0.07
UBAP1-202ENST00000359544 PTPN18Q99952 460 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 R3HDMLQ9H3Y0 253 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 SMYD3Q9H7B4 428 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 PCDH18Q9HCL0 1135 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 PCDHB2Q9Y5E7 798 aa15.5■□□□□ 0.07
UBAP1-202ENST00000359544 TTLL13PA6NNM8 815 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 MEI4A8MW99 385 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 PI4K2BG5E9Z4 385 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 HLA-DOAP06340 250 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 ADRB2P07550 413 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 MAGEA10P43363 369 aaPredicted RBP15.49■□□□□ 0.07
UBAP1-202ENST00000359544 GALK1P51570 392 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 EMP3P54852 163 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 ZNF200P98182 395 aaPredicted RBP15.49■□□□□ 0.07
UBAP1-202ENST00000359544 PLCB3Q01970 1234 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 WASHC5Q12768 1159 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 SNAPC2Q13487 334 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 KRT81Q14533 505 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 OGFRL1Q5TC84 451 aaPredicted RBP15.49■□□□□ 0.07
UBAP1-202ENST00000359544 PPP1R2P3Q6NXS1 205 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 MFSD7Q6UXD7 560 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 NAT8LQ8N9F0 302 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 CEP70Q8NHQ1 597 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 VCPIP1Q96JH7 1222 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 TMEM121Q9BTD3 319 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 ZNF696Q9H7X3 374 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 KLHL11Q9NVR0 708 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 IP6K2Q9UHH9 426 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 TLR3O15455 904 aaKnown RBP15.49■□□□□ 0.07
UBAP1-202ENST00000359544 GAS7O60861 476 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 KLHL2O95198 593 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 RAG1P15918 1043 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 PMLP29590 882 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 FAAP100Q0VG06 881 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 MAMLD1Q13495 774 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 USH1GQ495M9 461 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 MSS51Q4VC12 460 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 LLGL2Q6P1M3 1020 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 DUS1LQ6P1R4 473 aaKnown RBP15.49■□□□□ 0.07
UBAP1-202ENST00000359544 TRIM72Q6ZMU5 477 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 SPOCD1Q6ZMY3 1216 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 USP37Q86T82 979 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 CROCCP3Q8IVE0 287 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 SPIRE2Q8WWL2 714 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 RSPH1Q8WYR4 309 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 CPT1BQ92523 772 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 RAB26Q9ULW5 256 aa15.49■□□□□ 0.07
UBAP1-202ENST00000359544 SPAG6O75602 509 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 PIAS1O75925 651 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 C6orf222P0C671 652 aaPredicted RBP15.48■□□□□ 0.07
UBAP1-202ENST00000359544 CD97P48960 835 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 COPAP53621 1224 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 SLC25A3Q00325 362 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 BTKQ06187 659 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 BBS9Q3SYG4 887 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 SH3D19Q5HYK7 790 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 METTL25Q8N6Q8 603 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 ZFP28Q8NHY6 868 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 NLRP4Q96MN2 994 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 SENP7Q9BQF6 1050 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 C11orf70Q9BRQ4 267 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 WDR11Q9BZH6 1224 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 GRIP2Q9C0E4 1043 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 ITGA11Q9UKX5 1188 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 HBS1LQ9Y450 684 aaKnown RBP15.48■□□□□ 0.07
UBAP1-202ENST00000359544 SF3B1O75533 1304 aaKnown RBP eCLIP15.48■□□□□ 0.07
UBAP1-202ENST00000359544 GREB1LQ9C091 1923 aaPredicted RBP15.48■□□□□ 0.07
UBAP1-202ENST00000359544 SDR42E2A6NKP2 422 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 TRMUO75648 421 aaKnown RBP15.48■□□□□ 0.07
UBAP1-202ENST00000359544 FAM155BO75949 473 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 PTPRAP18433 802 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 SHMT1P34896 483 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 LBX1P52954 281 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 UBAP2LQ14157 1087 aaKnown RBP15.48■□□□□ 0.07
UBAP1-202ENST00000359544 TLR1Q15399 786 aa15.48■□□□□ 0.07
UBAP1-202ENST00000359544 SNRNP35Q16560 246 aaKnown RBP15.48■□□□□ 0.07
UBAP1-202ENST00000359544 SLC44A4Q53GD3 710 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms