RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 KRT34O76011 436 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 TOMM70O94826 608 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 ALBP02768 609 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 NUDT2P50583 147 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 MAP3K7CLP57077 242 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 NUP107P57740 925 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 TRIM16LQ309B1 348 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 TRMT5Q32P41 509 aaKnown RBP12.62□□□□□ -0.39
DNMT1-202ENST00000359526 UGT3A1Q6NUS8 523 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 SPIRE2Q8WWL2 714 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 PAFAH2Q99487 392 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 ZBTB48P10074 688 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-202ENST00000359526 TNFRSF8P28908 595 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 MEA1Q16626 185 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 EPC2Q52LR7 807 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 DCAF6Q58WW2 860 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 SPDYAQ5MJ70 313 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 CYP4A22Q5TCH4 519 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 TTC33Q6PID6 262 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-202ENST00000359526 ITIH5Q86UX2 942 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 UBA3Q8TBC4 463 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 WNK4Q96J92 1243 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 UTP6Q9NYH9 597 aaKnown RBP12.62□□□□□ -0.39
DNMT1-202ENST00000359526 CDV3Q9UKY7 258 aaKnown RBP12.62□□□□□ -0.39
DNMT1-202ENST00000359526 UBE2Q2LH0YL09 131 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 LRRC40Q9H9A6 602 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 PCDH9Q9HC56 1237 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 DDX20Q9UHI6 824 aaKnown RBP12.62□□□□□ -0.39
DNMT1-202ENST00000359526 GRAP2O75791 330 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 PDGFRBP09619 1106 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 HLA-DPA1P20036 260 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 ATP6V1E1P36543 226 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 ETFBP38117 255 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 ST8SIA6P61647 398 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 PLOD1Q02809 727 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-202ENST00000359526 RUNX1T1Q06455 604 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
DNMT1-202ENST00000359526 UNC45BQ8IWX7 931 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 SH3GL2Q99962 352 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 ZSCAN9O15535 394 aaPredicted RBP12.61□□□□□ -0.39
DNMT1-202ENST00000359526 RIPK2O43353 540 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 FAM200BP0CF97 657 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 TGM2P21980 687 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 LHX1P48742 406 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 MRPL28Q13084 256 aaKnown RBP12.61□□□□□ -0.39
DNMT1-202ENST00000359526 MPZL3Q6UWV2 235 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 BNC2Q6ZN30 1099 aaPredicted RBP12.61□□□□□ -0.39
DNMT1-202ENST00000359526 VPS37AQ8NEZ2 397 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 IPMKQ8NFU5 416 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 RIN3Q8TB24 985 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 ZNF507Q8TCN5 953 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 CAAP1Q9H8G2 361 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 C15orf41Q9Y2V0 281 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 NR2E3Q9Y5X4 410 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 WNT10BO00744 389 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 F9P00740 461 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 AMHP03971 560 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 ACCSLQ4AC99 568 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 THEMIS2Q5TEJ8 643 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 ZKSCAN4Q969J2 545 aaPredicted RBP12.61□□□□□ -0.39
DNMT1-202ENST00000359526 PABPC5Q96DU9 382 aaKnown RBP12.61□□□□□ -0.39
DNMT1-202ENST00000359526 PGM2Q96G03 612 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 VCPIP1Q96JH7 1222 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 C17orf80Q9BSJ5 609 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 OXCT2Q9BYC2 517 aaPredicted RBP12.61□□□□□ -0.39
DNMT1-202ENST00000359526 RRAGCQ9HB90 399 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 AGO4Q9HCK5 861 aaKnown RBP12.61□□□□□ -0.39
DNMT1-202ENST00000359526 PRDM5Q9NQX1 630 aaPredicted RBP12.61□□□□□ -0.39
DNMT1-202ENST00000359526 FAM49BQ9NUQ9 324 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 COL1A2P08123 1366 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 EVPLLA8MZ36 301 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 WDR47O94967 919 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 CASP4P49662 377 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 OTUD4Q01804 1114 aaKnown RBP12.61□□□□□ -0.39
DNMT1-202ENST00000359526 OVGP1Q12889 678 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 KIZQ2M2Z5 673 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 SDE2Q6IQ49 451 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 KDELC2Q7Z4H8 507 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 FAM9CQ8IZT9 166 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 ATG4AQ8WYN0 398 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 TAAR1Q96RJ0 339 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 PKP3Q9Y446 797 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 ROBO1Q9Y6N7 1651 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 SLIT2O94813 1529 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 LTBP3Q9NS15 1303 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 FAM237AA0A1B0GTK4 181 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 LRRC10BA6NIK2 292 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 PRPF4O43172 522 aaKnown RBP eCLIP12.61□□□□□ -0.39
DNMT1-202ENST00000359526 SHMT1P34896 483 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 ALDH1A3P47895 512 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 TMC3Q7Z5M5 1100 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 IFNEQ86WN2 208 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 CBWD2Q8IUF1 395 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 TMEM120AQ9BXJ8 343 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 KLHL4Q9C0H6 718 aa12.61□□□□□ -0.39
DNMT1-202ENST00000359526 VWA5AO00534 786 aa12.6□□□□□ -0.39
DNMT1-202ENST00000359526 AKAP3O75969 853 aa12.6□□□□□ -0.39
DNMT1-202ENST00000359526 UBOX5O94941 541 aa12.6□□□□□ -0.39
DNMT1-202ENST00000359526 ATXN3P54252 364 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms