RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FAM32AQ9Y421 112 aaKnown RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 TRPM1Q7Z4N2 1603 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SDR42E2A6NKP2 422 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 GZMAP12544 262 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 TTC30BQ8N4P2 665 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 FRMD8P1Q9BZ68 369 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 WASF2Q9Y6W5 498 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 RGS5O15539 181 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 TDP2O95551 362 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 RPA3P35244 121 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 TAF2Q6P1X5 1199 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 RNF135Q8IUD6 432 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 MCEEQ96PE7 176 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 UBE2OQ9C0C9 1292 aaKnown RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 FBXO9Q9UK97 447 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SLC9A1P19634 815 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 BNC1Q01954 994 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 FAM160B1Q5W0V3 765 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SPATA18Q8TC71 538 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 RAB6BQ9NRW1 208 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SPDYE2BA6NHP3 402 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SPDYE6P0CI01 402 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 HSMCR30P0CW71 290 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 ANO7Q6IWH7 933 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 ZNF662Q6ZS27 426 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 BNIPLQ7Z465 357 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 CLNKQ7Z7G1 428 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SLCO6A1Q86UG4 719 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 C8orf59Q8N0T1 100 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 CPXCR1Q8N123 301 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 PROX1Q92786 737 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 CDRT15Q96T59 188 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 GPC6Q9Y625 555 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-203ENST00000358544 SALL3Q9BXA9 1300 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 A0A0G2JLW4 131 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 CENPXA8MT69 81 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 ATP6V1E1P36543 226 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 RORBQ92753 470 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 RUSC1Q9BVN2 902 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 OSBPL10Q9BXB5 764 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 MAGEB5Q9BZ81 275 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 ARHGEF5Q12774 1597 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 KIF20BQ96Q89 1820 aa6.27□□□□□ -1.41
VPS13B-203ENST00000358544 RIMBP2O15034 1052 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 FKBP9O95302 570 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 FKBP9P1Q75LS8 142 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ECHDC2Q86YB7 292 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 C19orf18Q8NEA5 215 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 LRRC20Q8TCA0 184 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 RMDN1Q96DB5 314 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 TASP1Q9H6P5 420 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CCDC78A2IDD5 438 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CSPG5O95196 566 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 SLC1A6P48664 564 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 IST1P53990 364 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ZNF667Q5HYK9 610 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 SLC7A3Q8WY07 619 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CHORDC1Q9UHD1 332 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CAPN8A6NHC0 703 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 NADKO95544 446 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 TRIP4Q15650 581 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CCNG2Q16589 344 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PDK4Q16654 411 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CYB5RLQ6IPT4 315 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 RAB43Q86YS6 212 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 LRRC49Q8IUZ0 686 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 NKX1-2Q9UD57 310 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 SLC12A6Q9UHW9 1150 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CCDC189A1A4V9 331 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ASLP04424 464 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 FAAP100Q0VG06 881 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 TBC1D16Q8TBP0 767 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 TMEM245Q9H330 911 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 SYNPO2Q9UMS6 1093 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PSMD11O00231 422 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PLIN5Q00G26 463 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PIGHQ14442 188 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ZBTB33Q86T24 672 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 P3H2Q8IVL5 708 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 WDR41Q9HAD4 459 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PCDH9Q9HC56 1237 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 RPS8P62241 208 aaKnown RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 UTS2BQ765I0 119 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 SH3BP5LQ7L8J4 393 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PPHLN1Q8NEY8 458 aaKnown RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PCYOX1Q9UHG3 505 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ATP8B3O60423 1300 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PNPLA7Q6ZV29 1317 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 DENND3A2RUS2 1198 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PEX11AO75192 247 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PDE9AO76083 593 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PRLP01236 227 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CCNA2P20248 432 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 TPTEP56180 551 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 IL5RAQ01344 420 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 TOP3AQ13472 1001 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 KCNT1Q5JUK3 1230 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 RIC8BQ9NVN3 520 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 SEPT9Q9UHD8 586 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 FNDC3AQ9Y2H6 1198 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms