RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ERO1BQ86YB8 467 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 STAG2Q8N3U4 1231 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 MKNK1Q9BUB5 465 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 CTNNAL1Q9UBT7 734 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 PQBP1O60828 265 aaKnown RBP5.71□□□□□ -1.49
PTPRD-202ENST00000356435 CTDNEP1O95476 244 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 CNPP09543 421 aaKnown RBP5.71□□□□□ -1.49
PTPRD-202ENST00000356435 KLRC2P26717 231 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 GTF2H1P32780 548 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 SARSP49591 514 aaKnown RBP5.71□□□□□ -1.49
PTPRD-202ENST00000356435 GNA13Q14344 377 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 PGS1Q32NB8 556 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 GALNTL6Q49A17 601 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 KRT77Q7Z794 578 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 SRBD1Q8N5C6 995 aaKnown RBP5.71□□□□□ -1.49
PTPRD-202ENST00000356435 ST13P5Q8NFI4 369 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-202ENST00000356435 SLC30A5Q8TAD4 765 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 SPATA20Q8TB22 786 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 ARL2BPQ9Y2Y0 163 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 MYMKA6NI61 221 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 M0QYT0 321 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 PDHA1P08559 390 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 RAD23BP54727 409 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 CDK20Q8IZL9 346 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 SCAIQ8N9R8 606 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 SOCS4Q8WXH5 440 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 INPP5DQ92835 1189 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 C7orf25Q9BPX7 421 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 MIEF1Q9NQG6 463 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 MTO1Q9Y2Z2 717 aaKnown RBP5.71□□□□□ -1.49
PTPRD-202ENST00000356435 WEE2P0C1S8 567 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 HALP42357 657 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 MRPS25P82663 173 aaKnown RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 CUL2Q13617 745 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 LRRC14Q15048 493 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 SHC4Q6S5L8 630 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 MPZL3Q6UWV2 235 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 KIAA2013Q8IYS2 634 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 UBA3Q8TBC4 463 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 ZSCAN18Q8TBC5 510 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 ADI1Q9BV57 179 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 IARS2Q9NSE4 1012 aaKnown RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 DBR1Q9UK59 544 aaKnown RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 KIAA1257Q9ULG3 409 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 PNMA8BQ9ULN7 279 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 TBX20Q9UMR3 447 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 NCF1BA6NI72 391 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 NCF1CA8MVU1 366 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 ENO3P13929 434 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 NCF1P14598 390 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 PBX1P40424 430 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 RIPK1Q13546 671 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 BTG3Q14201 252 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 NCF4Q15080 339 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 NFE2Q16621 373 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 ATAD3BQ5T9A4 648 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 FAM71DQ8N9W8 422 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 ZNF512BQ96KM6 892 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 ECSITQ9BQ95 431 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 EXO5Q9H790 373 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 TBC1D13Q9NVG8 400 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 GRID1Q9ULK0 1009 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 KLHL20Q9Y2M5 609 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 DIP2AQ14689 1571 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 SLC12A8A0AV02 714 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 CBX4O00257 560 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 ABLIM1O14639 778 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 IGKV5-2P06315 115 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 BTKQ06187 659 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 FNDC3BQ53EP0 1204 aaKnown RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 EPHA10Q5JZY3 1008 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 ILDR1Q86SU0 546 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 PRMT1Q99873 361 aaKnown RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 MTG1Q9BT17 334 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 SEPT3Q9UH03 358 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 RAD54BQ9Y620 910 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 LIN7AO14910 233 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 CDH16O75309 829 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 IGSF6O95976 241 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 FGFR2P21802 821 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 CASP1P29466 404 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 RXRGP48443 463 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 CLK1P49759 484 aaKnown RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 PEX6Q13608 980 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 RETSATQ6NUM9 610 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 OTOAQ7RTW8 1153 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 PARP9Q8IXQ6 854 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 RNASE11Q8TAA1 199 aaKnown RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 CNDP1Q96KN2 507 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 ELOVL6Q9H5J4 265 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 IL1RL2Q9HB29 575 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 SPG21Q9NZD8 308 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 SPATA31A1Q5TZJ5 1347 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 LRRC14BA6NHZ5 514 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 TM9SF1O15321 606 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 NBNO60934 754 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 PMPCBO75439 489 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 THP07101 528 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 TAF13Q15543 124 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 SLC15A2Q16348 729 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms