RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SNX31Q8N9S9 440 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 RNF149Q8NC42 400 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 PIGBQ92521 554 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 FOPNLQ96NB1 174 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 GPR101Q96P66 508 aaPredicted RBP13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 A1CFQ9NQ94 594 aaKnown RBP13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 INTS13Q9NVM9 706 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 RAD54BQ9Y620 910 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.313e-10■■■■□ 20.3
SYNCRIP-201ENST00000355238 JAK1P23458 1154 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 ALDH1A3P47895 512 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 CCT8P50990 548 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 CUL2Q13617 745 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 EID3Q8N140 333 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 TSPAN14Q8NG11 270 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 NSMCE2Q96MF7 247 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 TBC1D10AQ9BXI6 508 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 INO80Q9ULG1 1556 aaPredicted RBP13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 NNMTP40261 264 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 MTTPP55157 894 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 KCNJ2P63252 427 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 FAXCQ5TGI0 409 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 NSUN4Q96CB9 384 aaKnown RBP13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 SENP2Q9HC62 589 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 TMCO1Q9UM00 188 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 DRD4P21917 467 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 MAPK1P28482 360 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 XIAPP98170 497 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 EPC2Q52LR7 807 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 SLC22A9Q8IVM8 553 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 TBC1D19Q8N5T2 526 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 ZNF518BQ9C0D4 1074 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 SLAIN2Q9P270 581 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 TMCC3Q9ULS5 477 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 ADCY6O43306 1168 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 RARBP10826 455 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 CYP11B2P19099 503 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 MUTP22033 750 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 TMEM132DQ14C87 1099 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 SAMD4BQ5PRF9 694 aaKnown RBP13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 CWF19L1Q69YN2 538 aaKnown RBP13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 EXOC3L1Q86VI1 746 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 ATG16L2Q8NAA4 619 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 APPL2Q8NEU8 664 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 DDX50Q9BQ39 737 aaKnown RBP13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 KCTD10Q9H3F6 313 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 IGSF9BQ9UPX0 1349 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 MYO5CQ9NQX4 1742 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 TOP3AQ13472 1001 aaPredicted RBP13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 ITGA9Q13797 1035 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 NR1D2Q14995 579 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 DCAF4L1Q3SXM0 396 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 PTRHD1Q6GMV3 140 aaKnown RBP13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 OTOAQ7RTW8 1153 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 KIAA1683Q9H0B3 1180 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 AK5Q9Y6K8 562 aa13.11□□□□□ -0.31
SYNCRIP-201ENST00000355238 TSPAN9O75954 239 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 HSMCR30P0CW71 290 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 PRIM2P49643 509 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 COX10Q12887 443 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 DGKDQ16760 1214 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 ASZ1Q8WWH4 475 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 RIT2Q99578 217 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 R3HDM2Q9Y2K5 976 aaKnown RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 ACOT9Q9Y305 439 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 MAP3K4Q9Y6R4 1608 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 GRAP2O75791 330 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 TOB1P50616 345 aaPredicted RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 GEMP55040 296 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 ITGA1P56199 1179 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 RIPK1Q13546 671 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 CYP4A22Q5TCH4 519 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 TMEM26Q6ZUK4 368 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 DENND5BQ6ZUT9 1274 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 LDHDQ86WU2 507 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 NDNQ99608 321 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 TMEM121Q9BTD3 319 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 ARMCX1Q9P291 453 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 BTBD3Q9Y2F9 522 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 SNX9Q9Y5X1 595 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 PLA2R1Q13018 1463 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 F8W810 466 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 OPLAHO14841 1288 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 GNL1P36915 607 aaPredicted RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 MGAT5Q09328 741 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 EPS8Q12929 822 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 PCSK7Q16549 785 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 KLHL17Q6TDP4 642 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 STRA8Q7Z7C7 330 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 PYDC1Q8WXC3 89 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 SRPK1Q96SB4 655 aaKnown RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 COPS7BQ9H9Q2 264 aaPredicted RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 BFSP2Q13515 415 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 PARP6Q2NL67 630 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 DHDDSQ86SQ9 333 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 CAMK1DQ8IU85 385 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 FAM84BQ96KN1 310 aaPredicted RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 PRRG3Q9BZD7 231 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 EPB41L4AQ9HCS5 686 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms