RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 RAB6CQ53S08 254 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 METTL7BQ6UX53 244 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 VPS52Q8N1B4 723 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 TMEM130Q8N3G9 435 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 NRG4Q8WWG1 115 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 PDGFDQ9GZP0 370 aaPredicted RBP25.52■■□□□ 1.68
CPNE1-202ENST00000352393 IQCGQ9H095 443 aaKnown RBP25.52■■□□□ 1.68
CPNE1-202ENST00000352393 RAB6CQ9H0N0 254 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 MKS1Q9NXB0 559 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 KCNK4Q9NYG8 393 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 PSMG1O95456 288 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 NFICP08651 508 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 SNRPAP09012 282 aaKnown RBP25.51■■□□□ 1.67
CPNE1-202ENST00000352393 PRKCHP24723 683 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 TMEM192Q8IY95 271 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 PPM1NQ8N819 430 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 FAM136AQ96C01 138 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 TMEM176AQ96HP8 235 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 RNF157Q96PX1 679 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 CDT1Q9H211 546 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 FZD8Q9H461 694 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 PLLPQ9Y342 182 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 C2CD4BA6NLJ0 364 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 CXorf49A8MYA2 514 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-202ENST00000352393 KRT37O76014 449 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 MAGEA6P43360 314 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 SESN3P58005 492 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 OCRLQ01968 901 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 CCDC6Q16204 474 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 SNX30Q5VWJ9 437 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 ALYREFQ86V81 257 aaKnown RBP25.51■■□□□ 1.67
CPNE1-202ENST00000352393 WDR60Q8WVS4 1066 aa25.51■■□□□ 1.67
CPNE1-202ENST00000352393 HMGCRP04035 888 aa25.5■■□□□ 1.67
CPNE1-202ENST00000352393 MRPS5P82675 430 aaKnown RBP25.5■■□□□ 1.67
CPNE1-202ENST00000352393 C1orf228Q6PIY5 440 aa25.5■■□□□ 1.67
CPNE1-202ENST00000352393 CDR2LQ86X02 465 aaPredicted RBP25.5■■□□□ 1.67
CPNE1-202ENST00000352393 TRIM42Q8IWZ5 723 aa25.5■■□□□ 1.67
CPNE1-202ENST00000352393 CTAGE3PQ8IX95 158 aa25.5■■□□□ 1.67
CPNE1-202ENST00000352393 APBB2Q92870 758 aa25.5■■□□□ 1.67
CPNE1-202ENST00000352393 ASCC2Q9H1I8 757 aaPredicted RBP25.5■■□□□ 1.67
CPNE1-202ENST00000352393 ZC3H7BQ9UGR2 993 aaKnown RBP25.5■■□□□ 1.67
CPNE1-202ENST00000352393 DPPA5A6NC42 116 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 PDHA1P08559 390 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 SLC34A1Q06495 639 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 KLC1Q07866 573 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 HSF5Q4G112 596 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-202ENST00000352393 CAND1Q86VP6 1230 aaKnown RBP25.49■■□□□ 1.67
CPNE1-202ENST00000352393 CXorf38Q8TB03 319 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 RPF1Q9H9Y2 349 aaKnown RBP25.49■■□□□ 1.67
CPNE1-202ENST00000352393 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.49■■□□□ 1.678e-7■□□□□ 11.1
CPNE1-202ENST00000352393 ARMCX1Q9P291 453 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 SOWAHBA6NEL2 793 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 CAPN14A8MX76 684 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 I3L4J1 428 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 KCNN4O15554 427 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 RFPL1O75677 317 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 OSBPP22059 807 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 GCLCP48506 637 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-202ENST00000352393 GMPSP49915 693 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-202ENST00000352393 BST1Q10588 318 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 LBRQ14739 615 aaKnown RBP25.49■■□□□ 1.67
CPNE1-202ENST00000352393 TEX44Q53QW1 395 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 CES4AQ5XG92 561 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 ILDR2Q71H61 639 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 TRIM50Q86XT4 487 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 PLD5Q8N7P1 536 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-202ENST00000352393 RXFP2Q8WXD0 754 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 MECRQ9BV79 373 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 SMYD2Q9NRG4 433 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 SIRPGQ9P1W8 387 aa25.49■■□□□ 1.67
CPNE1-202ENST00000352393 STX18Q9P2W9 335 aaKnown RBP25.49■■□□□ 1.67
CPNE1-202ENST00000352393 TRDMT1O14717 391 aaKnown RBP25.48■■□□□ 1.67
CPNE1-202ENST00000352393 RAP1GDS1P52306 607 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 C15orf59Q2T9L4 293 aaPredicted RBP25.48■■□□□ 1.67
CPNE1-202ENST00000352393 FAM182AQ5T1J6 154 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 LRRC74BQ6ZQY2 392 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 LRCH1Q9Y2L9 728 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 KAT6AQ92794 2004 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 CAPN9O14815 690 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 TBX10O75333 385 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 ITGB3P05106 788 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 VDRP11473 427 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 TGM2P21980 687 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 IL4RP24394 825 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 IRX1P78414 480 aaPredicted RBP25.48■■□□□ 1.67
CPNE1-202ENST00000352393 PRAMEF18Q5VWM3 479 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 IRGCQ6NXR0 463 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 PQLC3Q8N755 202 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 PIWIL1Q96J94 861 aaKnown RBP25.48■■□□□ 1.67
CPNE1-202ENST00000352393 CYP3A43Q9HB55 503 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 TNFSF13BQ9Y275 285 aa25.48■■□□□ 1.67
CPNE1-202ENST00000352393 A8MXQ7 604 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 INO80B-WBP1J3KQ70 363 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 PRPSAP2O60256 369 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 PEX10O60683 326 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 LGR5O75473 907 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 TGFB3P10600 412 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 PDGFRAP16234 1089 aa25.47■■□□□ 1.67
CPNE1-202ENST00000352393 TUBP50607 506 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms