RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SHKBP1Q8TBC3 707 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 DQX1Q8TE96 717 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 NKD2Q969F2 451 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 VPS50Q96JG6 964 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 MRPL1Q9BYD6 325 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 C1orf112Q9NSG2 853 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 FEM1BQ9UK73 627 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 INPP5FQ9Y2H2 1132 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 TMED5Q9Y3A6 229 aa10.73□□□□□ -0.69
CHRNA1-202ENST00000348749 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 CAPN8A6NHC0 703 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 BANF1O75531 89 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 CRTAMO95727 393 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 C6orf222P0C671 652 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 YWHABP31946 246 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 SFNP31947 248 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 ALDH18A1P54886 795 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 AQP5P55064 265 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 CLDN10P78369 228 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 COG7P83436 770 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 SLC25A3Q00325 362 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 C1QBPQ07021 282 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 BST1Q10588 318 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 WASHC5Q12768 1159 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 PTK7Q13308 1070 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 DACT2Q5SW24 774 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 C15orf39Q6ZRI6 1047 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 KBTBD6Q86V97 674 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 PHF13Q86YI8 300 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 MCF2L2Q86YR7 1114 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 CBWD2Q8IUF1 395 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 PPIL6Q8IXY8 311 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 CCDC33Q8N5R6 958 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 TMEM161BQ8NDZ6 487 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 CATSPER1Q8NEC5 780 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 SLC44A1Q8WWI5 657 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 PRPF31Q8WWY3 499 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 KCNN1Q92952 543 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 E2F7Q96AV8 911 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 C8orf37Q96NL8 207 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 ACAP3Q96P50 834 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 WDR83Q9BRX9 315 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 FRMD8P1Q9BZ68 369 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 STN1Q9H668 368 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 PFDN4Q9NQP4 134 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 KCNH7Q9NS40 1196 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 MKS1Q9NXB0 559 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 SIRPGQ9P1W8 387 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 CDH22Q9UJ99 828 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 PSMD13Q9UNM6 376 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 FAF1Q9UNN5 650 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 POMPQ9Y244 141 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 BCS1LQ9Y276 419 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 UBIAD1Q9Y5Z9 338 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 TRIM43BA6NCK2 446 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 TMEM247A6NEH6 219 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 MEI4A8MW99 385 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 TISP43B9A030 160 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 SNNO75324 88 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 SERPINB7O75635 380 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 STK10O94804 968 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 KLHL2O95198 593 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 ZBED1O96006 694 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 ITGB5P18084 799 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 CD58P19256 250 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 SERPINB6P35237 376 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 HSPA13P48723 471 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 CDK9P50750 372 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 PSMC5P62195 406 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 TMPRSS15P98073 1019 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 FNBP1LQ5T0N5 605 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 GRAMD4Q6IC98 578 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 PLEKHA7Q6IQ23 1121 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 CCDC80Q76M96 950 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 SV2AQ7L0J3 742 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 CRLF3Q8IUI8 442 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 PQLC1Q8N2U9 271 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 FBXO36Q8NEA4 188 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 TAS1R2Q8TE23 839 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 TRPC4APQ8TEL6 797 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 ABHD8Q96I13 439 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 SMYD3Q9H7B4 428 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 AGO4Q9HCK5 861 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 RSL24D1Q9UHA3 163 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 HBS1LQ9Y450 684 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 ZNF711Q9Y462 761 aa10.72□□□□□ -0.69
CHRNA1-202ENST00000348749 COPEO14579 308 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 SLC16A4O15374 487 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 FAM189A1O60320 539 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 DKC1O60832 514 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 FAM58BPP0C7Q3 252 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 SRGAP2CP0DJJ0 459 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 SRGAP2BP0DMP2 458 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 KRT5P13647 590 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 ATP6V1B1P15313 513 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 ACAT1P24752 427 aaKnown RBP10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 HOXD12P35452 270 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 COPAP53621 1224 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 HDAC4P56524 1084 aa10.71□□□□□ -0.69
CHRNA1-202ENST00000348749 PEX3P56589 373 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms