RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 PEX19P40855 299 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 RGS7P49802 495 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 SOX4Q06945 474 aaPredicted RBP22.22■■□□□ 1.15
PTPN18-202ENST00000347849 BLMHQ13867 455 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 PIGHQ14442 188 aaPredicted RBP22.22■■□□□ 1.15
PTPN18-202ENST00000347849 ZNF618Q5T7W0 954 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 SH3PXD2AQ5TCZ1 1133 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 TRNP1Q6NT89 227 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 SESTD1Q86VW0 696 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 C7orf31Q8N865 590 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 WNT8BQ93098 351 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 NT5C1AQ9BXI3 368 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 DPEP3Q9H4B8 488 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 TRABDQ9H4I3 376 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 ZWILCHQ9H900 591 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 CNTN3Q9P232 1028 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 GRID1Q9ULK0 1009 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 SMIM28A0A1B0GU29 152 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 HMGCRP04035 888 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 MYCNP04198 464 aaPredicted RBP22.22■■□□□ 1.15
PTPN18-202ENST00000347849 GNAZP19086 355 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 CALB2P22676 271 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 CDC42EP1Q00587 391 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 SPARCL1Q14515 664 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 TAF5Q15542 800 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 PKN2Q16513 984 aaKnown RBP22.22■■□□□ 1.15
PTPN18-202ENST00000347849 C9orf57Q5W0N0 161 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 CXCL17Q6UXB2 119 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 RELL1Q8IUW5 271 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 NIPA2Q8N8Q9 360 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 GLIS1Q8NBF1 620 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 DENND1AQ8TEH3 1009 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 SOCS4Q8WXH5 440 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 TRIB2Q92519 343 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 HAUS1Q96CS2 278 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 RNPEPL1Q9HAU8 725 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 RPA3P35244 121 aaPredicted RBP22.21■■□□□ 1.15
PTPN18-202ENST00000347849 SLC25A11Q02978 314 aaKnown RBP22.21■■□□□ 1.15
PTPN18-202ENST00000347849 SOWAHAQ2M3V2 549 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 SPOCD1Q6ZMY3 1216 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 LONP2Q86WA8 852 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 RCOR2Q8IZ40 523 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 AGGF1Q8N302 714 aaeCLIP22.21■■□□□ 1.15
PTPN18-202ENST00000347849 FAM13CQ8NE31 585 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 CFAP57Q96MR6 1250 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 TBC1D10AQ9BXI6 508 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 CORO1CQ9ULV4 474 aaPredicted RBP22.21■■□□□ 1.15
PTPN18-202ENST00000347849 LRRD1A4D1F6 860 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 E5RJQ4 531 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 GRAP2O75791 330 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 T-ENOLP0DO92 83 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 GM2AP17900 193 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 ALDH3A1P30838 453 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 HOXC8P31273 242 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 TAP1Q03518 808 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 GRIK3Q13003 919 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 GNASQ5JWF2 1037 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 LCLAT1Q6UWP7 414 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 TTC30AQ86WT1 665 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 SMG8Q8ND04 991 aaKnown RBP22.21■■□□□ 1.15
PTPN18-202ENST00000347849 ARMC2Q8NEN0 867 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 SAE1Q9UBE0 346 aaPredicted RBP22.21■■□□□ 1.15
PTPN18-202ENST00000347849 PCSK1NQ9UHG2 260 aa22.21■■□□□ 1.15
PTPN18-202ENST00000347849 MEIS3P2A8K0S8 358 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 PEX11AO75192 247 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 UPP2O95045 317 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 CBX6O95503 412 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 CD48P09326 243 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 ZSCAN5DPP0CG00 497 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 AKR1A1P14550 325 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 KLRC2P26717 231 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 GOLGA7BQ2TAP0 167 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 RIBC1Q8N443 379 aaPredicted RBP22.2■■□□□ 1.14
PTPN18-202ENST00000347849 ZCCHC9Q8N567 271 aaKnown RBP22.2■■□□□ 1.14
PTPN18-202ENST00000347849 SLC7A6OSQ96CW6 309 aaPredicted RBP22.2■■□□□ 1.14
PTPN18-202ENST00000347849 MCRS1Q96EZ8 462 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 CACNG4Q9UBN1 327 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 DNPEPQ9ULA0 475 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 DERAQ9Y315 318 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 Q9Y3F1 56 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 C3orf70A6NLC5 250 aaPredicted RBP22.2■■□□□ 1.14
PTPN18-202ENST00000347849 GABBR2O75899 941 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 FGFR1P11362 822 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 GABRB2P47870 512 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 LRRC38Q5VT99 294 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 PMF1Q6P1K2 205 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 BEST2Q8NFU1 509 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 LRRC8CQ8TDW0 803 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 NUDCD1Q96RS6 583 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 SMC6Q96SB8 1091 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 IPPQ9Y573 584 aa22.2■■□□□ 1.14
PTPN18-202ENST00000347849 H0Y3Z8 333 aa22.19■■□□□ 1.14
PTPN18-202ENST00000347849 LUC7L3O95232 432 aaKnown RBP22.19■■□□□ 1.14
PTPN18-202ENST00000347849 CA4P22748 312 aa22.19■■□□□ 1.14
PTPN18-202ENST00000347849 LMO2P25791 158 aa22.19■■□□□ 1.14
PTPN18-202ENST00000347849 EPHB2P29323 1055 aa22.19■■□□□ 1.14
PTPN18-202ENST00000347849 CDKN2BP42772 138 aa22.19■■□□□ 1.14
PTPN18-202ENST00000347849 CRYBB1P53674 252 aaPredicted RBP22.19■■□□□ 1.14
PTPN18-202ENST00000347849 FASTKD3Q14CZ7 662 aaKnown RBP22.19■■□□□ 1.14
PTPN18-202ENST00000347849 FAM102AQ5T9C2 384 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms