RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 RAB23Q9ULC3 237 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 PTPRUQ92729 1446 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 CCDC188H7C350 402 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 GRAP2O75791 330 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 PRPF39Q86UA1 669 aaKnown RBP12.18□□□□□ -0.46
TRAF3-201ENST00000347662 KAT2BQ92831 832 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 FAM136AQ96C01 138 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 PNMA5Q96PV4 448 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 PRRG3Q9BZD7 231 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 RAB6BQ9NRW1 208 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 SAE1Q9UBE0 346 aaPredicted RBP12.18□□□□□ -0.46
TRAF3-201ENST00000347662 BTBD3Q9Y2F9 522 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 CPT1AP50416 773 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 SMU1Q2TAY7 513 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 RGL4Q8IZJ4 473 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 SERAC1Q96JX3 654 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 CYLDQ9NQC7 956 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 NYAP2Q9P242 653 aa12.18□□□□□ -0.46
TRAF3-201ENST00000347662 STAU1O95793 577 aaKnown RBP12.17□□□□□ -0.46
TRAF3-201ENST00000347662 GGCXP38435 758 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 TCEA2Q15560 299 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 CARNMT1Q8N4J0 409 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 PRRG4Q9BZD6 226 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 WDR41Q9HAD4 459 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
TRAF3-201ENST00000347662 TBX3O15119 743 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 ALDH7A1P49419 539 aaKnown RBP12.17□□□□□ -0.46
TRAF3-201ENST00000347662 PSMD7P51665 324 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 PKN2Q16513 984 aaKnown RBP12.17□□□□□ -0.46
TRAF3-201ENST00000347662 TTLL9Q3SXZ7 439 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 HPS6Q86YV9 775 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 FAM20CQ8IXL6 584 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 PRKAG3Q9UGI9 489 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 CEBPGP53567 150 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 PRKAA1Q13131 559 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 TMEM132DQ14C87 1099 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 TDRD10Q5VZ19 366 aaKnown RBP12.17□□□□□ -0.46
TRAF3-201ENST00000347662 CLIP3Q96DZ5 547 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 WNT8AQ9H1J5 351 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 GPR75-ASB3A0A0A6YYF3 556 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 ADM5C9JUS6 153 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 HIST1H2ABP04908 130 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 ATP6V1B2P21281 511 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 CCT3P49368 545 aaKnown RBP12.17□□□□□ -0.46
TRAF3-201ENST00000347662 CYP4A22Q5TCH4 519 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 HIST3H2AQ7L7L0 130 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 UTP15Q8TED0 518 aaKnown RBP12.17□□□□□ -0.46
TRAF3-201ENST00000347662 HIST1H2ACQ93077 130 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 MED15Q96RN5 788 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 RMND5AQ9H871 391 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 AAASQ9NRG9 546 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 TIMM44O43615 452 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 ZNF23P17027 643 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 CYP4X1Q8N118 509 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 GPRASP2Q96D09 838 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 TAAR1Q96RJ0 339 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 ZNF609O15014 1411 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 A0A1W2PRG6 482 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 MEI4A8MW99 385 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 CNOT3O75175 753 aaKnown RBP12.17□□□□□ -0.46
TRAF3-201ENST00000347662 CLK2P49760 499 aaKnown RBP12.17□□□□□ -0.46
TRAF3-201ENST00000347662 EFNA5P52803 228 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 TRAP1Q12931 704 aaKnown RBP12.17□□□□□ -0.46
TRAF3-201ENST00000347662 ZNF671Q8TAW3 534 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 TPD52L3Q96J77 140 aa12.17□□□□□ -0.46
TRAF3-201ENST00000347662 SNX4O95219 450 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 NCAM1P13591 858 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 ITGA4P13612 1032 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 CAP2P40123 477 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 GSSP48637 474 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 STXBP1P61764 594 aaKnown RBP12.16□□□□□ -0.46
TRAF3-201ENST00000347662 TAP1Q03518 808 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 PDIA6Q15084 440 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 KLK14Q9P0G3 267 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 SETBP1Q9Y6X0 1596 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 IFRD1O00458 451 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-201ENST00000347662 PAICSP22234 425 aaKnown RBP12.16□□□□□ -0.46
TRAF3-201ENST00000347662 IL12RB1P42701 662 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 SRP54P61011 504 aaKnown RBP12.16□□□□□ -0.46
TRAF3-201ENST00000347662 BTN3A2P78410 334 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 SGMS1Q86VZ5 419 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 CHPFQ8IZ52 775 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 BLOC1S5Q8TDH9 187 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 GRXCR2A6NFK2 248 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 LGALS3BPQ08380 585 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 PREX1Q8TCU6 1659 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 FAM25EA8MYX2 175 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 SOAT2O75908 522 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 BMP10O95393 424 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 SBK1Q52WX2 424 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 DEFB128Q7Z7B8 93 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 ATG16L2Q8NAA4 619 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 DDHD1Q8NEL9 900 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 CAB39LQ9H9S4 337 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 EPB41L4AQ9HCS5 686 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-201ENST00000347662 COMMD9Q9P000 198 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 NAGPAQ9UK23 515 aa12.16□□□□□ -0.46
TRAF3-201ENST00000347662 MIF4GDA9UHW6 222 aaKnown RBP12.16□□□□□ -0.46
TRAF3-201ENST00000347662 ZNF862O60290 1169 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms