RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 RBP1P09455 135 aa23.83■■□□□ 1.41
NPAS3-201ENST00000346562 THRAP10827 490 aa23.83■■□□□ 1.41
NPAS3-201ENST00000346562 ORC1Q13415 861 aa23.83■■□□□ 1.41
NPAS3-201ENST00000346562 MKRN4PQ13434 485 aaPredicted RBP23.83■■□□□ 1.41
NPAS3-201ENST00000346562 SPIRE2Q8WWL2 714 aa23.83■■□□□ 1.4
NPAS3-201ENST00000346562 DNAJC9Q8WXX5 260 aa23.83■■□□□ 1.4
NPAS3-201ENST00000346562 IL17RAQ96F46 866 aa23.83■■□□□ 1.4
NPAS3-201ENST00000346562 MAGEB10Q96LZ2 347 aaPredicted RBP23.83■■□□□ 1.4
NPAS3-201ENST00000346562 SOX6P35712 828 aa23.83■■□□□ 1.4
NPAS3-201ENST00000346562 KCNJ1P48048 391 aa23.83■■□□□ 1.4
NPAS3-201ENST00000346562 SEZ6Q53EL9 994 aa23.83■■□□□ 1.4
NPAS3-201ENST00000346562 FAXCQ5TGI0 409 aa23.83■■□□□ 1.4
NPAS3-201ENST00000346562 LRRC8DQ7L1W4 858 aa23.83■■□□□ 1.4
NPAS3-201ENST00000346562 ZCCHC17Q9NP64 241 aaKnown RBP23.83■■□□□ 1.4
NPAS3-201ENST00000346562 PADI4Q9UM07 663 aa23.83■■□□□ 1.4
NPAS3-201ENST00000346562 C1orf167Q5SNV9 1468 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 CD163L1Q9NR16 1453 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 LOC100653049A0A140TA62 436 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 GNG14A0A1W2PPG7 69 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 KANSL1LA0AUZ9 987 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 PLA2G6O60733 806 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 KRT34O76011 436 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 FBXO36Q8NEA4 188 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 DEPDC7Q96QD5 511 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 BST2Q10589 180 aaKnown RBP23.82■■□□□ 1.4
NPAS3-201ENST00000346562 SLC15A2Q16348 729 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 BMP10O95393 424 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 PCNX4Q63HM2 1172 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 CARD9Q9H257 536 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 CYP3A43Q9HB55 503 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 AP4E1Q9UPM8 1137 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 CPSF4O95639 269 aaKnown RBP23.82■■□□□ 1.4
NPAS3-201ENST00000346562 LSM8O95777 96 aaKnown RBP23.82■■□□□ 1.4
NPAS3-201ENST00000346562 MYL4P12829 197 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 PPP4CP60510 307 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 CYLC2Q14093 348 aaPredicted RBP23.82■■□□□ 1.4
NPAS3-201ENST00000346562 PKN2Q16513 984 aaKnown RBP23.82■■□□□ 1.4
NPAS3-201ENST00000346562 ZCCHC8Q6NZY4 707 aaKnown RBP23.82■■□□□ 1.4
NPAS3-201ENST00000346562 FAM111AQ96PZ2 611 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 CIPCQ9C0C6 399 aa23.82■■□□□ 1.4
NPAS3-201ENST00000346562 NAT9Q9BTE0 207 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 GANQ9H2C0 597 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 OSGEPL1Q9H4B0 414 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 XPO1O14980 1071 aaKnown RBP23.81■■□□□ 1.4
NPAS3-201ENST00000346562 CHRNB3Q05901 458 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 ILF2Q12905 390 aaKnown RBP23.81■■□□□ 1.4
NPAS3-201ENST00000346562 SLC44A2Q8IWA5 706 aaPredicted RBP23.81■■□□□ 1.4
NPAS3-201ENST00000346562 PPP1R14AQ96A00 147 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 SH3GL1Q99961 368 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 ITGA11Q9UKX5 1188 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 MSH3P20585 1137 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 GMCL1P1Q8NEA9 526 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 OSCP1Q8WVF1 389 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 SLC37A4O43826 429 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 PCDH8O95206 1070 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 ALDH2P05091 517 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 TMEM154Q6P9G4 183 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 ARID3BQ8IVW6 561 aaPredicted RBP23.81■■□□□ 1.4
NPAS3-201ENST00000346562 TC2NQ8N9U0 490 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 IRX2Q9BZI1 471 aaPredicted RBP23.81■■□□□ 1.4
NPAS3-201ENST00000346562 GYPCP04921 128 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 KLRC1P26715 233 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 EPHX2P34913 555 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 RAP1GAPP47736 663 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 MTM1Q13496 603 aa23.81■■□□□ 1.4
NPAS3-201ENST00000346562 GBA2Q9HCG7 927 aaPredicted RBP23.81■■□□□ 1.4
NPAS3-201ENST00000346562 NFIBO00712 420 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 PON1P27169 355 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 NUP62P37198 522 aaPredicted RBP23.8■■□□□ 1.4
NPAS3-201ENST00000346562 NFE2Q16621 373 aaPredicted RBP23.8■■□□□ 1.4
NPAS3-201ENST00000346562 CYP4Z2PQ8N1L4 340 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.8■■□□□ 1.4
NPAS3-201ENST00000346562 ZIM3Q96PE6 472 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 SHCBP1LQ9BZQ2 653 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 PTPN3P26045 913 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 SERPINB1P30740 379 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 NFYCQ13952 458 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 Q4G0T1 1027 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 CNPY3Q9BT09 278 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 CBX4O00257 560 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 PTPAQ15257 358 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 TMEM176AQ96HP8 235 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 AHSPQ9NZD4 102 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 RNF17Q9BXT8 1623 aaKnown RBP23.8■■□□□ 1.4
NPAS3-201ENST00000346562 CYP2A7P20853 494 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 HALP42357 657 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 RAD9BQ6WBX8 426 aa23.8■■□□□ 1.4
NPAS3-201ENST00000346562 SLCO1B7G3V0H7 640 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 NCAM2O15394 837 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 YWHAQP27348 245 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 SHROOM1Q2M3G4 852 aaPredicted RBP23.79■■□□□ 1.4
NPAS3-201ENST00000346562 LRRC6Q86X45 466 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 TMC2Q8TDI7 906 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 PXMP2Q9NR77 195 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 PPP1R3GB7ZBB8 358 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 SERPINB5P36952 375 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 SLC29A2Q14542 456 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 GSTA3Q16772 222 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 ATP6AP1LQ52LC2 224 aa23.79■■□□□ 1.4
NPAS3-201ENST00000346562 CLEC17AQ6ZS10 378 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms