RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 HEY1Q9Y5J3 304 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 CCL15-CCL14A0A0B4J2E2 113 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 MGRN1O60291 552 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 TFDP2Q14188 446 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 GRB14Q14449 540 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 KRT81Q14533 505 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 PDK4Q16654 411 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 CCL15Q16663 113 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 DGKDQ16760 1214 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 FAM47CQ5HY64 1035 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 SLC27A1Q6PCB7 646 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 ALKAL1Q6UXT8 129 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 TBC1D1Q86TI0 1168 aaPredicted RBP16.1■□□□□ 0.17
UPF3B-202ENST00000345865 TTC39CQ8N584 583 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 NPLOC4Q8TAT6 608 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 KLF6Q99612 283 aaPredicted RBP16.1■□□□□ 0.17
UPF3B-202ENST00000345865 PLEKHA5Q9HAU0 1116 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 PHTF1Q9UMS5 762 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 TEX264Q9Y6I9 313 aa16.1■□□□□ 0.17
UPF3B-202ENST00000345865 CEP350Q5VT06 3117 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.09■□□□□ 0.17
UPF3B-202ENST00000345865 GOLGA8RI6L899 631 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 AKAP5P24588 427 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 RBL1P28749 1068 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 KCNJ2P63252 427 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 STILQ15468 1287 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 BOLA3Q53S33 107 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 FAXCQ5TGI0 409 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 RNF43Q68DV7 783 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 LVRNQ6Q4G3 990 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 RGS9BPQ6ZS82 235 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 CATSPER4Q7RTX7 472 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 OR6B3Q8NGW1 331 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.09■□□□□ 0.17
UPF3B-202ENST00000345865 TINF2Q9BSI4 451 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 ECT2Q9H8V3 914 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 RXFP1Q9HBX9 757 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 DOCK3Q8IZD9 2030 aa16.09■□□□□ 0.17
UPF3B-202ENST00000345865 TCRBV9S1A1TA0A576 114 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 KBTBD13C9JR72 458 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 KCNN4O15554 427 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 ECM2O94769 699 aaPredicted RBP16.08■□□□□ 0.17
UPF3B-202ENST00000345865 LMO2P25791 158 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 SDC4P31431 198 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 PDK2Q15119 407 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 PRAMEF19Q5SWL8 479 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 ZNF618Q5T7W0 954 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 ZNF276Q8N554 614 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 C7orf31Q8N865 590 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 FAF2Q96CS3 445 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 SYT17Q9BSW7 474 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 RAB6BQ9NRW1 208 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 KLHL14Q9P2G3 628 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 DERAQ9Y315 318 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 STARD13Q9Y3M8 1113 aa16.08■□□□□ 0.17
UPF3B-202ENST00000345865 TRIP12Q14669 1992 aaPredicted RBP16.08■□□□□ 0.17
UPF3B-202ENST00000345865 SMAPO00193 183 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 SPTLC1O15269 473 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 RECQL4O94761 1208 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 PDGFRBP09619 1106 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 CCDC130P13994 396 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 ADRA1DP25100 572 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 YARSP54577 528 aaKnown RBP16.08■□□□□ 0.16
UPF3B-202ENST00000345865 KLHL38Q2WGJ6 581 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 C9orf57Q5W0N0 161 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 SLC9A4Q6AI14 798 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 KBTBD7Q8WVZ9 684 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 TEKT4Q8WW24 435 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 TMEM40Q8WWA1 233 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 GRAMD1AQ96CP6 724 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 APOL6Q9BWW8 343 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 ABHD16BQ9H3Z7 469 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 TRIM33Q9UPN9 1127 aa16.08■□□□□ 0.16
UPF3B-202ENST00000345865 APOL1O14791 398 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 EDF1O60869 148 aaKnown RBP16.07■□□□□ 0.16
UPF3B-202ENST00000345865 C1QAP02745 245 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 MSH2P43246 934 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 BCAR1P56945 870 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 SLC10A2Q12908 348 aaPredicted RBP16.07■□□□□ 0.16
UPF3B-202ENST00000345865 KBTBD12Q3ZCT8 623 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 PPP6R3Q5H9R7 873 aaPredicted RBP16.07■□□□□ 0.16
UPF3B-202ENST00000345865 PRPF39Q86UA1 669 aaKnown RBP16.07■□□□□ 0.16
UPF3B-202ENST00000345865 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 LENG1Q96BZ8 264 aaPredicted RBP16.07■□□□□ 0.16
UPF3B-202ENST00000345865 RTP4Q96DX8 246 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 C11orf84Q9BUA3 381 aaPredicted RBP16.07■□□□□ 0.16
UPF3B-202ENST00000345865 GCOM2Q9BZD3 368 aaPredicted RBP16.07■□□□□ 0.16
UPF3B-202ENST00000345865 PLAC1Q9HBJ0 212 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 KLK14Q9P0G3 267 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 SLC17A7Q9P2U7 560 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 PDCD11Q14690 1871 aaKnown RBP16.07■□□□□ 0.16
UPF3B-202ENST00000345865 A8MXQ7 604 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 CHADO15335 359 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 DYNC1LI2O43237 492 aaPredicted RBP16.07■□□□□ 0.16
UPF3B-202ENST00000345865 SMIM10L2AP0DMW4 78 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 SMIM10L2BP0DMW5 78 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 RDXP35241 583 aaKnown RBP16.07■□□□□ 0.16
UPF3B-202ENST00000345865 SESTD1Q86VW0 696 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 KIF2BQ8N4N8 673 aa16.07■□□□□ 0.16
UPF3B-202ENST00000345865 CCDC33Q8N5R6 958 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms