RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 ADGRF2Q8IZF7 708 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 TPD52L3Q96J77 140 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 OXCT2Q9BYC2 517 aaPredicted RBP12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 MYLK2Q9H1R3 596 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 EIF3LQ9Y262 564 aaKnown RBP12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 TSC22D4Q9Y3Q8 395 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 PSMC3P17980 439 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 MSH3P20585 1137 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 TGM2P21980 687 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 DSG4Q86SJ6 1040 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 ATL2Q8NHH9 583 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 RBM15Q96T37 977 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 CORO1BQ9BR76 489 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 WWP1Q9H0M0 922 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 IARS2Q9NSE4 1012 aaKnown RBP12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 TMCC3Q9ULS5 477 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 CLTBP09497 229 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 DEFA1P59665 94 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 DEFA3P59666 94 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 ZNF543Q08ER8 600 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 BOP1Q14137 746 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 PDK1Q15118 436 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 FBXO38Q6PIJ6 1188 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 MOSPD2Q8NHP6 518 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 KIF2CQ99661 725 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 KDM6AO15550 1401 aaPredicted RBP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 OPLAHO14841 1288 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 GET4Q7L5D6 327 aaPredicted RBP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 NAT16Q8N8M0 369 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 SH3GL1Q99961 368 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 USP20Q9Y2K6 914 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 TRDMT1O14717 391 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 PDHBP11177 359 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 HSPA9P38646 679 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 KLC1Q07866 573 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 CSTF3Q12996 717 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 USP7Q93009 1102 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 ACOX2Q99424 681 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 AVENQ9NQS1 362 aaPredicted RBP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 KCNH7Q9NS40 1196 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 NUDT5Q9UKK9 219 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 SPATA31A5Q5VU36 1347 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 SPATA31A7Q8IWB4 1347 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 ERI2A8K979 691 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 CAMTA2O94983 1202 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 ITGA3P26006 1051 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 NUDT2P50583 147 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 PTK6Q13882 451 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 RIN2Q8WYP3 895 aaPredicted RBP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 RFFLQ8WZ73 363 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 RHOBTB2Q9BYZ6 727 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 RIC8BQ9NVN3 520 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 NRKQ7Z2Y5 1582 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 PLEKHG2Q9H7P9 1386 aa12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 TTC39BQ5VTQ0 682 aaPredicted RBP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 POP1Q99575 1024 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-202ENST00000344404 HNRNPRO43390 633 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 UBTFL6P0CB48 400 aaPredicted RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 ACAT1P24752 427 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 FMO5P49326 533 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 TTLL9Q3SXZ7 439 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 CACHD1Q5VU97 1274 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 CAMKK2Q96RR4 588 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 MXRA8Q9BRK3 442 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 TRPM5Q9NZQ8 1165 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 TFR2Q9UP52 801 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 CCNT2O60583 730 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 PLA2G6O60733 806 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 LTFP02788 710 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 SUPT20HL2P0C7V6 817 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 ACADSBP45954 432 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 CASP4P49662 377 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 STX4Q12846 297 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 FRMD5Q7Z6J6 570 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 TRAPPC12Q8WVT3 735 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 MTG1Q9BT17 334 aaPredicted RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 CELF4Q9BZC1 486 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 ABCG4Q9H172 646 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 TLR8Q9NR97 1041 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 AASDHPPTQ9NRN7 309 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 ALBP02768 609 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 ATP6V1B1P15313 513 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 RPS12P25398 132 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 GRK4P32298 578 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 EFHC1Q5JVL4 640 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 HERC6Q8IVU3 1022 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 CHST13Q8NET6 341 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 GINS4Q9BRT9 223 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 CLPBQ9H078 707 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 PCDHGA3Q9Y5H0 932 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 MEI4A8MW99 385 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 ANXA11P50995 505 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 BYSLQ13895 437 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 NLRP14Q86W24 1093 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 SOAT2O75908 522 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 TCEA1P23193 301 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 NECTIN1Q15223 517 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 SH2D3CQ8N5H7 860 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 MANSC4A6NHS7 340 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms