RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 SNPHO15079 494 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 CNOT3O75175 753 aaKnown RBP12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 BCL10O95999 233 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 FDFT1P37268 417 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 NCKAP1LP55160 1127 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 POU5F2Q8N7G0 328 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 RAET1EQ8TD07 263 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 KLHL31Q9H511 634 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 UBAP1Q9NZ09 502 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 N6AMT1Q9Y5N5 214 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 PNPLA7Q6ZV29 1317 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 CDC42BPGQ6DT37 1551 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 ADGRA3Q8IWK6 1321 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 ZNF839A8K0R7 811 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 CFAP99D6REC4 459 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 ALDH1A3P47895 512 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 PEX5P50542 639 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 CDH24Q86UP0 819 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 MED8Q96G25 268 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 SERHL2Q9H4I8 314 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 SERHLQ9NQF3 203 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 TRPC4Q9UBN4 977 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 TBX20Q9UMR3 447 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 EFCAB6Q5THR3 1501 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 EIF3DO15371 548 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 LTFP02788 710 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 SLC1A6P48664 564 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 NT5DC3Q86UY8 548 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 MIB1Q86YT6 1006 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 SEPT1Q8WYJ6 367 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 ARMCX1Q9P291 453 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 MGAT4DA6NG13 374 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 ZNF189O75820 626 aaPredicted RBP12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 ANXA9O76027 345 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 PAN2Q504Q3 1202 aaKnown RBP12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 TAF2Q6P1X5 1199 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 CARNMT1Q8N4J0 409 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 RPRD1AQ96P16 312 aaPredicted RBP12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 FICDQ9BVA6 458 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 AGPAT3Q9NRZ7 376 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 CYP39A1Q9NYL5 469 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 SDR42E2A6NKP2 422 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 TK2O00142 265 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 VPS26AO75436 327 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 ITGAXP20702 1163 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 SNX17Q15036 470 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 EDRF1Q3B7T1 1238 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 CYP2R1Q6VVX0 501 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 EFL1Q7Z2Z2 1120 aaKnown RBP12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 ATP8B4Q8TF62 1192 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 OLFM1Q99784 485 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 MXRA8Q9BRK3 442 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 MCM8Q9UJA3 840 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
SEMA6A-202ENST00000343348 CNTNAP5Q8WYK1 1306 aa12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 NRKQ7Z2Y5 1582 aa12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 KIAA0391O15091 583 aaKnown RBP12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 INPP4BO15327 924 aa12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 PSTPIP1O43586 416 aa12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 PLA2G6O60733 806 aa12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 STAU1O95793 577 aaKnown RBP12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 FAM228AQ86W67 206 aa12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 CLVS1Q8IUQ0 354 aaPredicted RBP12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 MTFMTQ96DP5 389 aaKnown RBP12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 RXFP1Q9HBX9 757 aa12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 ASNA1O43681 348 aa12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 CYP2B6P20813 491 aa12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 ANTXR2P58335 489 aa12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 TRIQKQ629K1 86 aa12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 AVENQ9NQS1 362 aaPredicted RBP12.52□□□□□ -0.4
SEMA6A-202ENST00000343348 IGSF9BQ9UPX0 1349 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 TSPAN3O60637 253 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 DDR2Q16832 855 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 WHRNQ9P202 907 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 RFX7Q2KHR2 1363 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 SH3BGRLO75368 114 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 GLI1P08151 1106 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 SLC2A4P14672 509 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 PRKCQQ04759 706 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 TSGA10IPQ3SY00 556 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 FBXO25Q8TCJ0 367 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 TSEN34Q9BSV6 310 aaKnown RBP12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 KRCC1Q9NPI7 259 aaPredicted RBP12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 STK39Q9UEW8 545 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 ARHGAP31Q2M1Z3 1444 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 ZSCAN5CA6NGD5 496 aaPredicted RBP12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 SNUPNO95149 360 aaKnown RBP12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 EIF2S1P05198 315 aaKnown RBP12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 FAM58BPP0C7Q3 252 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 FDPSP14324 419 aaKnown RBP12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 ACO1P21399 889 aaKnown RBP12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 CCNG1P51959 295 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 CAMK2GQ13555 558 aaPredicted RBP12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 IER5Q5VY09 327 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 KCNV1Q6PIU1 500 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 CES3Q6UWW8 571 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 ST13P5Q8NFI4 369 aaPredicted RBP12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 GINS4Q9BRT9 223 aa12.52□□□□□ -0.41
SEMA6A-202ENST00000343348 RPS6KB2Q9UBS0 482 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms