RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 SLC4A11Q8NBS3 891 aa21.27■■□□□ 1
SYNE2-201ENST00000341472 SLC35C1Q96A29 364 aa21.27■■□□□ 1
SYNE2-201ENST00000341472 OTUB2Q96DC9 234 aa21.27■■□□□ 1
SYNE2-201ENST00000341472 ZFRQ96KR1 1074 aaKnown RBP21.27■■□□□ 1
SYNE2-201ENST00000341472 DUSP9Q99956 384 aaKnown RBP21.27■■□□□ 1
SYNE2-201ENST00000341472 SPTBN4Q9H254 2564 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 TBX18O95935 607 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 ADH1CP00326 375 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 BMP6P22004 513 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 HOXC13P31276 330 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 ATP5C1P36542 298 aaKnown RBP21.26■□□□□ 0.99
SYNE2-201ENST00000341472 CUL2Q13617 745 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 MORC3Q14149 939 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 LPAL2Q16609 132 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 GAB4Q2WGN9 574 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 CCDC40Q4G0X9 1142 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 CAMKK1Q8N5S9 505 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 RPLP0P6Q8NHW5 317 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 NELFBQ8WX92 580 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 EZH1Q92800 747 aaPredicted RBP21.26■□□□□ 0.99
SYNE2-201ENST00000341472 ARID3AQ99856 593 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 UBXN6Q9BZV1 441 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 GMEB2Q9UKD1 530 aa21.26■□□□□ 0.99
SYNE2-201ENST00000341472 BICDL2A1A5D9 508 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 BIN1O00499 593 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 CYP26A1O43174 497 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 RARGP13631 454 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 SLC6A11P48066 632 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 PXNP49023 591 aaPredicted RBP21.25■□□□□ 0.99
SYNE2-201ENST00000341472 YWHAEP62258 255 aaKnown RBP21.25■□□□□ 0.99
SYNE2-201ENST00000341472 SRSF5Q13243 272 aaKnown RBP21.25■□□□□ 0.99
SYNE2-201ENST00000341472 ARHGAP17Q68EM7 881 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 TTI2Q6NXR4 508 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 FOXR2Q6PJQ5 311 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 CEP68Q76N32 757 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 PNKPQ96T60 521 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 KLF16Q9BXK1 252 aaPredicted RBP21.25■□□□□ 0.99
SYNE2-201ENST00000341472 NMUR1Q9HB89 426 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 CYLDQ9NQC7 956 aa21.25■□□□□ 0.99
SYNE2-201ENST00000341472 POLR3BQ9NW08 1133 aaPredicted RBP21.25■□□□□ 0.99
SYNE2-201ENST00000341472 CCDC163A0A0D9SF12 145 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 A0A1W2PQH9 124 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 IRF1P10914 325 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 ADH5P11766 374 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 ID4P47928 161 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 FMO5P49326 533 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 SLC8A3P57103 927 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 GAD2Q05329 585 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 LRMPQ12912 555 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 LY6G5CQ5SRR4 150 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 LAIR1Q6GTX8 287 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 SYT13Q7L8C5 426 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 TADA2BQ86TJ2 420 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 ANKRD52Q8NB46 1076 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 ACDQ96AP0 544 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 OSER1Q9NX31 292 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 NAGPAQ9UK23 515 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 USP3Q9Y6I4 520 aa21.24■□□□□ 0.99
SYNE2-201ENST00000341472 K7EQS6 105 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 PMM2O15305 246 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 RALAP11233 206 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 EIF2DP41214 584 aaKnown RBP21.23■□□□□ 0.99
SYNE2-201ENST00000341472 PLA2G4AP47712 749 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 PSEN1P49768 467 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 GOLGA8FQ08AF8 430 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 GOLGA8DPQ0D2H9 430 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 CETN1Q12798 172 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 BTBD8Q5XKL5 378 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 KLHDC10Q6PID8 442 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 HTR3DQ70Z44 454 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 CCDC186Q7Z3E2 898 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 SCD5Q86SK9 330 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 BBS7Q8IWZ6 715 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 USP33Q8TEY7 942 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 WBP2Q969T9 261 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.23■□□□□ 0.99
SYNE2-201ENST00000341472 CHMP5Q9NZZ3 219 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 DNMT3LQ9UJW3 386 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 KIAA1257Q9ULG3 409 aa21.23■□□□□ 0.99
SYNE2-201ENST00000341472 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.22■□□□□ 0.99
SYNE2-201ENST00000341472 GNA14O95837 355 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 APODP05090 189 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 RETP07949 1114 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 TBXAS1P24557 533 aaPredicted RBP21.22■□□□□ 0.99
SYNE2-201ENST00000341472 SEC13P55735 322 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 STX17P56962 302 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 UBE2HP62256 183 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 DMC1Q14565 340 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 C2orf27AQ580R0 203 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 C10orf120Q5SQS8 335 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 PIGZQ86VD9 579 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 TMEM25Q86YD3 366 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 ZNF276Q8N554 614 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 ARHGEF4Q9NR80 690 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 CLIC5Q9NZA1 410 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 LSM7Q9UK45 103 aaKnown RBP21.22■□□□□ 0.99
SYNE2-201ENST00000341472 NUDT5Q9UKK9 219 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 CTNND2Q9UQB3 1225 aa21.22■□□□□ 0.99
SYNE2-201ENST00000341472 A0A0A0MRY4 1105 aa21.21■□□□□ 0.99
SYNE2-201ENST00000341472 AXIN1O15169 862 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms