RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 CEP63Q96MT8 703 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 NACC1Q96RE7 527 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 ZIC5Q96T25 663 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 RIT2Q99578 217 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 PDCD2LQ9BRP1 358 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 EHD1Q9H4M9 534 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 PXMP2Q9NR77 195 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 TBC1D23Q9NUY8 699 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 MKS1Q9NXB0 559 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 PARP14Q460N5 1801 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 BRCA2P51587 3418 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 NOTOA8MTQ0 251 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 TGFB1I1O43294 461 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 AQP9O43315 295 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 FKBP6O75344 327 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 USP2O75604 605 aaPredicted RBP12.32□□□□□ -0.44
RTN3-203ENST00000341307 TM7SF2O76062 418 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 TTC4O95801 387 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 CHRNB2P17787 502 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 OVGP1Q12889 678 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 SF3B4Q15427 424 aaKnown RBP eCLIP12.32□□□□□ -0.44
RTN3-203ENST00000341307 USP41Q3LFD5 358 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 IRF2BP2Q7Z5L9 587 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 LRRC49Q8IUZ0 686 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.32□□□□□ -0.44
RTN3-203ENST00000341307 REPS2Q8NFH8 660 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 PPP1R14CQ8TAE6 165 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 PYDC1Q8WXC3 89 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 BTBD9Q96Q07 612 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 ZNF696Q9H7X3 374 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 GBA2Q9HCG7 927 aaPredicted RBP12.32□□□□□ -0.44
RTN3-203ENST00000341307 GINM1Q9NU53 330 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 GIN1Q9NXP7 522 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 THEGQ9P2T0 379 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 ZNF214Q9UL59 606 aaPredicted RBP12.32□□□□□ -0.44
RTN3-203ENST00000341307 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.32□□□□□ -0.44
RTN3-203ENST00000341307 TMEM88BA6NKF7 163 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 DENRO43583 198 aaKnown RBP12.32□□□□□ -0.44
RTN3-203ENST00000341307 STAMBPO95630 424 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 NR3C1P04150 777 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 CHRNA3P32297 505 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 CDK9P50750 372 aaKnown RBP12.32□□□□□ -0.44
RTN3-203ENST00000341307 HUNKP57058 714 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 KCNH2Q12809 1159 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 SLC1A5Q15758 541 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 EDRF1Q3B7T1 1238 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 DCAF17Q5H9S7 520 aaPredicted RBP12.32□□□□□ -0.44
RTN3-203ENST00000341307 CYP4F22Q6NT55 531 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 CCDC110Q8TBZ0 833 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 MAML1Q92585 1016 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 ZNF75CPQ92670 426 aaPredicted RBP12.32□□□□□ -0.44
RTN3-203ENST00000341307 FIZ1Q96SL8 496 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 CTRCQ99895 268 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 OSBPL8Q9BZF1 889 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 PARVGQ9HBI0 331 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 ZFYVE28Q9HCC9 887 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
RTN3-203ENST00000341307 FRMPD4Q14CM0 1322 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 A0A0A6YYK5 440 aaPredicted RBP12.31□□□□□ -0.44
RTN3-203ENST00000341307 ARHGEF35A5YM69 484 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 TTC34A8MYJ7 566 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 B2RBV5 119 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 CDH16O75309 829 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 CIB2O75838 187 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 CCNE2O96020 404 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 APOEP02649 317 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 THRAP10827 490 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 ACTN1P12814 892 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 DSG3P32926 999 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 NCKAP1LP55160 1127 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 NPEPPSP55786 919 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 GHRHRQ02643 423 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 ZBTB17Q13105 803 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 PDE1CQ14123 709 aaPredicted RBP12.31□□□□□ -0.44
RTN3-203ENST00000341307 GK3PQ14409 553 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 ODR4Q5SWX8 454 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 C1orf146Q5VVC0 180 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 OGFOD2Q6N063 350 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 NANOGP8Q6NSW7 305 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 FOXR2Q6PJQ5 311 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 VPS36Q86VN1 386 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 ANKMY2Q8IV38 441 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 DAW1Q8N136 415 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 RBM15BQ8NDT2 890 aaKnown RBP12.31□□□□□ -0.44
RTN3-203ENST00000341307 ALG3Q92685 438 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 EFHD2Q96C19 240 aaPredicted RBP12.31□□□□□ -0.44
RTN3-203ENST00000341307 GCNAQ96QF7 691 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 GANQ9H2C0 597 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 C17orf75Q9HAS0 396 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 OSGEPQ9NPF4 335 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 OLFML3Q9NRN5 406 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 NCKIPSDQ9NZQ3 722 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 VPS51Q9UID3 782 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 DIS3Q9Y2L1 958 aaKnown RBP12.31□□□□□ -0.44
RTN3-203ENST00000341307 RLFQ13129 1914 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 A0A0G2JND7 137 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 H3BRJ5 948 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 PDXKO00764 312 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 FOXD2O60548 495 aaPredicted RBP12.31□□□□□ -0.44
RTN3-203ENST00000341307 BAIAP3O94812 1187 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms