RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 ADCY7P51828 1080 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 C19orf57Q0VDD7 668 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 PPP1R26Q5T8A7 1209 aaPredicted RBP17.57■□□□□ 0.4
CDK11B-201ENST00000340677 PRUNE1Q86TP1 453 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 CLEC10AQ8IUN9 316 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 TMEM237Q96Q45 408 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 APOL5Q9BWW9 433 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 TMEM39BQ9GZU3 492 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 TP63Q9H3D4 680 aaPredicted RBP17.57■□□□□ 0.4
CDK11B-201ENST00000340677 NLRC4Q9NPP4 1024 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 TAS2R7Q9NYW3 318 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 STRIP2Q9ULQ0 834 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 LRRIQ4A6NIV6 560 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 TRIM75PA6NK02 468 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 ATMINO43313 823 aaPredicted RBP17.57■□□□□ 0.4
CDK11B-201ENST00000340677 CHN1P15882 459 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 PSMA4P25789 261 aaKnown RBP17.57■□□□□ 0.4
CDK11B-201ENST00000340677 NADK2Q4G0N4 442 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 TMC5Q6UXY8 1006 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 APOBEC3FQ8IUX4 373 aaKnown RBP17.57■□□□□ 0.4
CDK11B-201ENST00000340677 LINC00518Q8N0U6 118 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 FANK1Q8TC84 345 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 CCDC138Q96M89 665 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 TEPSINQ96N21 525 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 TUBA1CQ9BQE3 449 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 SLC35C2Q9NQQ7 365 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.57■□□□□ 0.4
CDK11B-201ENST00000340677 HPSEQ9Y251 543 aa17.57■□□□□ 0.4
CDK11B-201ENST00000340677 VWA5AO00534 786 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 EGFRP00533 1210 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 EPHB2P29323 1055 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 MAPKAPK2P49137 400 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 VCPP55072 806 aaKnown RBP17.56■□□□□ 0.4
CDK11B-201ENST00000340677 NLRP11P59045 1033 aaKnown RBP17.56■□□□□ 0.4
CDK11B-201ENST00000340677 POU6F2P78424 691 aaPredicted RBP17.56■□□□□ 0.4
CDK11B-201ENST00000340677 RRP1BQ14684 758 aaKnown RBP17.56■□□□□ 0.4
CDK11B-201ENST00000340677 BORAQ6PGQ7 559 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 IZUMO2Q6UXV1 221 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 TAS2R42Q7RTR8 314 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 NET1Q7Z628 596 aaPredicted RBP17.56■□□□□ 0.4
CDK11B-201ENST00000340677 ZNF579Q8NAF0 562 aaKnown RBP17.56■□□□□ 0.4
CDK11B-201ENST00000340677 FAM149B1Q96BN6 582 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 TOE1Q96GM8 510 aaKnown RBP17.56■□□□□ 0.4
CDK11B-201ENST00000340677 KCNN2Q9H2S1 579 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 CUEDC2Q9H467 287 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 VPS37BQ9H9H4 285 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 STMN3Q9NZ72 180 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 PPP2R3BQ9Y5P8 575 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.56■□□□□ 0.4
CDK11B-201ENST00000340677 PVALEFA0A1B0GWK0 134 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 O00370 1275 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 GDF11O95390 407 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 GJB6O95452 261 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 FOSP01100 380 aaPredicted RBP17.56■□□□□ 0.4
CDK11B-201ENST00000340677 SMIM18P0DKX4 95 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 CASP1P29466 404 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 CAP2P40123 477 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 ARHGDIAP52565 204 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 DSG1Q02413 1049 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 BTNL9Q6UXG8 535 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 RAPH1Q70E73 1250 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 HEATR3Q7Z4Q2 680 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 METTL25Q8N6Q8 603 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 SPATA4Q8NEY3 305 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 FAM167AQ96KS9 214 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 PSD2Q9BQI7 771 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 TBC1D10AQ9BXI6 508 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 ZNF717Q9BY31 904 aaPredicted RBP17.56■□□□□ 0.4
CDK11B-201ENST00000340677 C6orf50Q9HD87 102 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 PCDH12Q9NPG4 1184 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 RIC8AQ9NPQ8 531 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 SLC39A1Q9NY26 324 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 RRN3Q9NYV6 651 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 SLC7A8Q9UHI5 535 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 GMEB2Q9UKD1 530 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 TMX2Q9Y320 296 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 PCDHGA10Q9Y5H3 936 aa17.56■□□□□ 0.4
CDK11B-201ENST00000340677 PI15O43692 258 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 TFAP2AP05549 437 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 SLURP2P0DP57 97 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 DBTP11182 482 aaKnown RBP17.55■□□□□ 0.4
CDK11B-201ENST00000340677 VEGFAP15692 232 aaPredicted RBP17.55■□□□□ 0.4
CDK11B-201ENST00000340677 PTPREP23469 700 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 FMR1Q06787 632 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDK11B-201ENST00000340677 BTN2A1Q7KYR7 527 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 ZNF572Q7Z3I7 529 aaPredicted RBP17.55■□□□□ 0.4
CDK11B-201ENST00000340677 ADAMTSL2Q86TH1 951 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 GALNT13Q8IUC8 556 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 ANKLE1Q8NAG6 615 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 TTC13Q8NBP0 860 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 GPKOWQ92917 476 aaPredicted RBP eCLIP17.55■□□□□ 0.4
CDK11B-201ENST00000340677 PIGSQ96S52 555 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 ECSITQ9BQ95 431 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 GDF3Q9NR23 364 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.55■□□□□ 0.4
CDK11B-201ENST00000340677 F5H6K3 240 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 TRDMT1O14717 391 aaKnown RBP17.55■□□□□ 0.4
CDK11B-201ENST00000340677 POP4O95707 220 aaKnown RBP17.55■□□□□ 0.4
CDK11B-201ENST00000340677 ASNSP08243 561 aa17.55■□□□□ 0.4
CDK11B-201ENST00000340677 MUTP22033 750 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms