RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SLC9A3R1O14745 358 aaPredicted RBP20.19■□□□□ 0.82
SYNE4-202ENST00000340477 COCHO43405 550 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 ZNF165P49910 485 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 COPB1P53618 953 aaKnown RBP20.19■□□□□ 0.82
SYNE4-202ENST00000340477 VCPP55072 806 aaKnown RBP20.19■□□□□ 0.82
SYNE4-202ENST00000340477 TPM4P67936 248 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 RAPGEF1Q13905 1077 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 KIAA1958Q8N8K9 716 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 PJA1Q8NG27 643 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 SHC3Q92529 594 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 EXOC4Q96A65 974 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 PCMTD1Q96MG8 357 aaPredicted RBP20.19■□□□□ 0.82
SYNE4-202ENST00000340477 LIMA1Q9UHB6 759 aaKnown RBP20.19■□□□□ 0.82
SYNE4-202ENST00000340477 SH3BP1Q9Y3L3 701 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 USP3Q9Y6I4 520 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 ZNF318Q5VUA4 2279 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 ZBED1O96006 694 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 RARGP13631 454 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 ATP5C1P36542 298 aaKnown RBP20.18■□□□□ 0.82
SYNE4-202ENST00000340477 BPIFB4P59827 614 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 APBA1Q02410 837 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 PTK2Q05397 1052 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 ADIGQ0VDE8 80 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 NR1H3Q13133 447 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 MEA1Q16626 185 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 RAB41Q5JT25 222 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 C10orf120Q5SQS8 335 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 RSRC2Q7L4I2 434 aaKnown RBP20.18■□□□□ 0.82
SYNE4-202ENST00000340477 RALGPS2Q86X27 583 aaPredicted RBP20.18■□□□□ 0.82
SYNE4-202ENST00000340477 KCTD13Q8WZ19 329 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 SECISBP2LQ93073 1101 aaKnown RBP20.18■□□□□ 0.82
SYNE4-202ENST00000340477 DDX23Q9BUQ8 820 aaKnown RBP20.18■□□□□ 0.82
SYNE4-202ENST00000340477 OSBPL6Q9BZF3 934 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 FOXQ1Q9C009 403 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 RNF38Q9H0F5 515 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 LTB4R2Q9NPC1 389 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 SIX2Q9NPC8 291 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 CYLDQ9NQC7 956 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 GTSE1Q9NYZ3 720 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 CLIC5Q9NZA1 410 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 CFAP97Q9P2B7 532 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 DAAM1Q9Y4D1 1078 aa20.18■□□□□ 0.82
SYNE4-202ENST00000340477 NFATC1O95644 943 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 MAGEA9P43362 315 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 TNK2Q07912 1038 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 RUNX3Q13761 415 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 KLHDC7AQ5VTJ3 777 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 TMEM105Q8N8V8 129 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 TTC8Q8TAM2 541 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 FAM3CQ92520 227 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 GOLGA1Q92805 767 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 FAM83CQ9BQN1 747 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 ULBP1Q9BZM6 244 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 EBF3Q9H4W6 596 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 PLCB1Q9NQ66 1216 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 CNGB3Q9NQW8 809 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 DNMT3LQ9UJW3 386 aa20.17■□□□□ 0.82
SYNE4-202ENST00000340477 FAM170BA6NMN3 283 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 LGALS16A8MUM7 142 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 CAVIN2O95810 425 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 LCP1P13796 627 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 ZNF18P17022 549 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 RGS7P49802 495 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 YWHAGP61981 247 aaKnown RBP eCLIP20.16■□□□□ 0.82
SYNE4-202ENST00000340477 PKDCCQ504Y2 493 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 IER5LQ5T953 404 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 TRIM68Q6AZZ1 485 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 KLHDC10Q6PID8 442 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 ZNF606Q8WXB4 792 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 HSFY1Q96LI6 401 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 ST7Q9NRC1 585 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.16■□□□□ 0.82
SYNE4-202ENST00000340477 TBC1D14Q9P2M4 693 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 LSM7Q9UK45 103 aaKnown RBP20.16■□□□□ 0.82
SYNE4-202ENST00000340477 STRIP2Q9ULQ0 834 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 NDRG2Q9UN36 371 aaKnown RBP20.16■□□□□ 0.82
SYNE4-202ENST00000340477 CEP83Q9Y592 693 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 WNT6Q9Y6F9 365 aa20.16■□□□□ 0.82
SYNE4-202ENST00000340477 E2F8A0AVK6 867 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 SPECC1L-ADORA2AF8WAN1 911 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 TULP2O00295 520 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 FBXO21O94952 628 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 CALCAP01258 141 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 IRF1P10914 325 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 UCHL3P15374 230 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 CD72P21854 359 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 CTHP32929 405 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 ACADSBP45954 432 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 UBXN1Q04323 297 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 KCNMA1Q12791 1236 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 NCAPHQ15003 741 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 FILIP1LQ4L180 1135 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 BTBD8Q5XKL5 378 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 RIN3Q8TB24 985 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 SLC35F5Q8WV83 523 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 NOX5Q96PH1 765 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 ZSWIM1Q9BR11 485 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 PDCL3Q9H2J4 239 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 NMUR1Q9HB89 426 aa20.15■□□□□ 0.82
SYNE4-202ENST00000340477 OLA1Q9NTK5 396 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms