RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 C3orf62Q6ZUJ4 267 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 C12orf29Q8N999 325 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 FBXO36Q8NEA4 188 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 KLHDC9Q8NEP7 349 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 SPATA18Q8TC71 538 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 DNAJB3Q8WWF6 145 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 MCRS1Q96EZ8 462 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 SLCO1B3Q9NPD5 702 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.03■□□□□ 0.32
LITAF-201ENST00000339430 PSMC3IPQ9P2W1 217 aaPredicted RBP17.03■□□□□ 0.32
LITAF-201ENST00000339430 XPO7Q9UIA9 1087 aaKnown RBP17.03■□□□□ 0.32
LITAF-201ENST00000339430 RABGEF1Q9UJ41 708 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 EFR3BQ9Y2G0 817 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 TRIP12Q14669 1992 aaPredicted RBP17.03■□□□□ 0.32
LITAF-201ENST00000339430 SMIM35A0A1B0GVV1 85 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 CHUKO15111 745 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 RBP3P10745 1247 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 RGS7P49802 495 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 TMEM132DQ14C87 1099 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 SLC1A5Q15758 541 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 TAZQ16635 292 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 OR6B2Q6IFH4 312 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 DENND1AQ8TEH3 1009 aa17.03■□□□□ 0.32
LITAF-201ENST00000339430 E5RJQ4 531 aa17.02■□□□□ 0.32
LITAF-201ENST00000339430 MCF2LO15068 1137 aa17.02■□□□□ 0.32
LITAF-201ENST00000339430 MCF2P10911 925 aa17.02■□□□□ 0.32
LITAF-201ENST00000339430 CDH6P55285 790 aa17.02■□□□□ 0.32
LITAF-201ENST00000339430 GEMIN4P57678 1058 aaKnown RBP17.02■□□□□ 0.32
LITAF-201ENST00000339430 SPARCL1Q14515 664 aa17.02■□□□□ 0.32
LITAF-201ENST00000339430 GALNTL6Q49A17 601 aa17.02■□□□□ 0.32
LITAF-201ENST00000339430 CCSAPQ6IQ19 270 aaPredicted RBP17.02■□□□□ 0.32
LITAF-201ENST00000339430 KIF2BQ8N4N8 673 aa17.02■□□□□ 0.32
LITAF-201ENST00000339430 CMASQ8NFW8 434 aaPredicted RBP17.02■□□□□ 0.32
LITAF-201ENST00000339430 FBF1Q8TES7 1133 aa17.02■□□□□ 0.32
LITAF-201ENST00000339430 HMX1Q9NP08 348 aaPredicted RBP17.02■□□□□ 0.32
LITAF-201ENST00000339430 UBN1Q9NPG3 1134 aa17.02■□□□□ 0.32
LITAF-201ENST00000339430 KLHL14Q9P2G3 628 aa17.02■□□□□ 0.32
LITAF-201ENST00000339430 BAIAP2L1Q9UHR4 511 aa17.02■□□□□ 0.32
LITAF-201ENST00000339430 APOC4-APOC2K7ER74 178 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 PRPF4O43172 522 aaKnown RBP eCLIP17.02■□□□□ 0.31
LITAF-201ENST00000339430 MGRN1O60291 552 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 APOC2P02655 101 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 VDRP11473 427 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 GNAT1P11488 350 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 KRT4P19013 534 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 HOXC8P31273 242 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 FAM47CQ5HY64 1035 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 FAM183BPQ6ZVS7 135 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 ECHDC2Q86YB7 292 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 IFNLR1Q8IU57 520 aaPredicted RBP17.02■□□□□ 0.31
LITAF-201ENST00000339430 PALM2Q8IXS6 379 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 SH3TC2Q8TF17 1288 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 RXFP2Q8WXD0 754 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 CXCL16Q9H2A7 254 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 ASNSD1Q9NWL6 643 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 TSPAN16Q9UKR8 245 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 PHTF1Q9UMS5 762 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 TRIM33Q9UPN9 1127 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 SCN10AQ9Y5Y9 1956 aa17.02■□□□□ 0.31
LITAF-201ENST00000339430 GOLGA8RI6L899 631 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 MAP3K6O95382 1288 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 PDGFRAP16234 1089 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 CST5P28325 142 aaPredicted RBP17.01■□□□□ 0.31
LITAF-201ENST00000339430 GABRB2P47870 512 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 ATP11AP98196 1134 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 EFHC2Q5JST6 749 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 DARS2Q6PI48 645 aaKnown RBP17.01■□□□□ 0.31
LITAF-201ENST00000339430 C1orf228Q6PIY5 440 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 RNF180Q86T96 592 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 ZNF410Q86VK4 478 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 CEP57Q86XR8 500 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 ATP11CQ8NB49 1132 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 PCSK9Q8NBP7 692 aaKnown RBP17.01■□□□□ 0.31
LITAF-201ENST00000339430 KLF6Q99612 283 aaPredicted RBP17.01■□□□□ 0.31
LITAF-201ENST00000339430 ADAMTS10Q9H324 1103 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 C12orf65Q9H3J6 166 aaKnown RBP17.01■□□□□ 0.31
LITAF-201ENST00000339430 CDHR5Q9HBB8 845 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 RXFP1Q9HBX9 757 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 GPATCH2LQ9NWQ4 482 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 DPP3Q9NY33 737 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 SLC24A2Q9UI40 661 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 CHMP2BQ9UQN3 213 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 SCN1AP35498 2009 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 GPR32O75388 356 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 P4HA1P13674 534 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 GPD1P21695 349 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 ATICP31939 592 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 PHBP35232 272 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 GSCP56915 257 aaPredicted RBP17.01■□□□□ 0.31
LITAF-201ENST00000339430 BNIP1Q12981 228 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 DPYSL3Q14195 570 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 SCYL2Q6P3W7 929 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 LRRN4Q8WUT4 740 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 PAFAH2Q99487 392 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 ASB7Q9H672 318 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 WBP1LQ9NX94 342 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 GTF2IRD1Q9UHL9 959 aa17.01■□□□□ 0.31
LITAF-201ENST00000339430 WDR91A4D1P6 747 aa17■□□□□ 0.31
LITAF-201ENST00000339430 NDC80O14777 642 aa17■□□□□ 0.31
LITAF-201ENST00000339430 ATP6V1G2O95670 118 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms