RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 DCDC5Q6ZRR9 648 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 ARHGEF18Q6ZSZ5 1173 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 GSTA5Q7RTV2 222 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 ANKS1BQ7Z6G8 1248 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 C4orf33Q8N1A6 199 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 LARGE2Q8N3Y3 721 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 SLC25A41Q8N5S1 370 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 SPERTQ8NA61 448 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 GMCL1P1Q8NEA9 526 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 ACTRT2Q8TDY3 377 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 ACSF2Q96CM8 615 aaPredicted RBP13.09□□□□□ -0.31
DFFB-202ENST00000339350 ACCSQ96QU6 501 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 RRN3Q9NYV6 651 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 UVRAGQ9P2Y5 699 aa13.09□□□□□ -0.31
DFFB-202ENST00000339350 LOC105371267A0A1B0GV96 52 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 BUD23O43709 281 aaKnown RBP13.08□□□□□ -0.32
DFFB-202ENST00000339350 DDHD2O94830 711 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 CHRNB1P11230 501 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 ETS1P14921 441 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 IVDP26440 423 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 ADSSP30520 456 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 HSD17B4P51659 736 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 CTAG1AP78358 180 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 ATP13A4Q4VNC1 1196 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 RFPL4BQ6ZWI9 263 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 TRMT10CQ7L0Y3 403 aaKnown RBP13.08□□□□□ -0.32
DFFB-202ENST00000339350 STRA6Q9BX79 667 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 RSPH9Q9H1X1 276 aaPredicted RBP13.08□□□□□ -0.32
DFFB-202ENST00000339350 LRRC19Q9H756 370 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.08□□□□□ -0.32
DFFB-202ENST00000339350 ZFYVE28Q9HCC9 887 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 KCNH7Q9NS40 1196 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 COL20A1Q9P218 1284 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 ZNHIT2Q9UHR6 403 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 GTF3C4Q9UKN8 822 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 BANF1O75531 89 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 PGM1P36871 562 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 GSSP48637 474 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 HIRAP54198 1017 aaPredicted RBP13.08□□□□□ -0.32
DFFB-202ENST00000339350 MFAP3P55082 362 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 SP4Q02446 784 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 COL19A1Q14993 1142 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 REM2Q8IYK8 340 aaPredicted RBP13.08□□□□□ -0.32
DFFB-202ENST00000339350 SERPINB12Q96P63 405 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 IFT122Q9HBG6 1241 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 TAS2R1Q9NYW7 299 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 PCDHGA3Q9Y5H0 932 aa13.08□□□□□ -0.32
DFFB-202ENST00000339350 GGPS1O95749 300 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 EGFRP00533 1210 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 KRT10P13645 584 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 RARRES1P49788 294 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 AP2B1P63010 937 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 FASTKD3Q14CZ7 662 aaKnown RBP13.07□□□□□ -0.32
DFFB-202ENST00000339350 KCNJ8Q15842 424 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 RHBDF2Q6PJF5 856 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 CENPSQ8N2Z9 138 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 SUN5Q8TC36 379 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 HELQQ8TDG4 1101 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 ROPN1BQ9BZX4 212 aaPredicted RBP13.07□□□□□ -0.32
DFFB-202ENST00000339350 ROPN1Q9HAT0 212 aaPredicted RBP13.07□□□□□ -0.32
DFFB-202ENST00000339350 SAR1AQ9NR31 198 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 SLC38A7Q9NVC3 462 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 AK5Q9Y6K8 562 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 KAT6AQ92794 2004 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 LTBP1Q14766 1721 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 PIK3CDO00329 1044 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 FSCN2O14926 492 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 ENO2P09104 434 aaPredicted RBP13.07□□□□□ -0.32
DFFB-202ENST00000339350 CPA2P48052 419 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 IL9RQ01113 521 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 RASA2Q15283 850 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 CLUL1Q15846 466 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 TMEM63BQ5T3F8 832 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 IZUMO3Q5VZ72 239 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 OGFOD2Q6N063 350 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 LRRC6Q86X45 466 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 SLC9A9Q8IVB4 645 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 SHC3Q92529 594 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 PRR11Q96HE9 360 aaPredicted RBP13.07□□□□□ -0.32
DFFB-202ENST00000339350 DCLK3Q9C098 648 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 C12orf65Q9H3J6 166 aaKnown RBP13.07□□□□□ -0.32
DFFB-202ENST00000339350 TBC1D23Q9NUY8 699 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 DCTN4Q9UJW0 460 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 PCDHGB4Q9UN71 923 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 PCDHGB5Q9Y5G0 923 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 WDR91A4D1P6 747 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 A8MXQ7 604 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 GOLGA8SH3BPF8 625 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 GOLGA8MH3BSY2 632 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 NFIBO00712 420 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 ZBTB11O95625 1053 aaPredicted RBP13.07□□□□□ -0.32
DFFB-202ENST00000339350 GZMAP12544 262 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 GLULP15104 373 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 CETN2P41208 172 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 WDR4P57081 412 aaKnown RBP13.07□□□□□ -0.32
DFFB-202ENST00000339350 TAS2R40P59535 323 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 RALGDSQ12967 914 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 PHKG1Q16816 387 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 POTEHQ6S545 545 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 RIPOR1Q6ZS17 1223 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms