RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PNMA8AQ86V59 439 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 OSTM1Q86WC4 334 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 SPNS2Q8IVW8 549 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 PLD5Q8N7P1 536 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 DEPDC1BQ8WUY9 529 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 KBTBD7Q8WVZ9 684 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 WNT8BQ93098 351 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 LGMNQ99538 433 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 CCDC77Q9BR77 488 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 CNPY3Q9BT09 278 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 ROPN1BQ9BZX4 212 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 STMN4Q9H169 189 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 ABHD16BQ9H3Z7 469 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 ROPN1Q9HAT0 212 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 HESX1Q9UBX0 185 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 STK38LQ9Y2H1 464 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 FARP1Q9Y4F1 1045 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 SNX10Q9Y5X0 201 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 MAD1L1Q9Y6D9 718 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 C5orf60A6NFR6 353 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 CCT8L1PA6NM43 557 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 A6NNZ2 444 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 F8W810 466 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 GOT1P17174 413 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 GRM5P41594 1212 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 KCNJ2P63252 427 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 MORF4L2Q15014 288 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 SNX17Q15036 470 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 TUBB8Q3ZCM7 444 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 CXCL17Q6UXB2 119 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 PPIL6Q8IXY8 311 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 EXOC8Q8IYI6 725 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 NAT8LQ8N9F0 302 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 SHCBP1Q8NEM2 672 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 L3MBTL3Q96JM7 780 aaPredicted RBP9.22□□□□□ -0.93
SNCA-201ENST00000336904 TBCBQ99426 244 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 TMEM109Q9BVC6 243 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 PCDH18Q9HCL0 1135 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 PCDH10Q9P2E7 1040 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 RABGEF1Q9UJ41 708 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 DCTN4Q9UJW0 460 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 CCDC195A0A1B0GUA6 201 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 CXorf49A8MYA2 514 aaPredicted RBP9.22□□□□□ -0.93
SNCA-201ENST00000336904 APOC4-APOC2K7ER74 178 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 SNX3O60493 162 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 ZBED1O96006 694 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 APOC2P02655 101 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 GNL1P36915 607 aaPredicted RBP9.22□□□□□ -0.93
SNCA-201ENST00000336904 CAV1Q03135 178 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 LMNB2Q03252 620 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 TAP1Q03518 808 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 STAT4Q14765 748 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 FAM187BQ17R55 369 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 DCAF6Q58WW2 860 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 FBXO47Q5MNV8 452 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 SPRYD7Q5W111 196 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 WSCD1Q658N2 575 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 LVRNQ6Q4G3 990 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 CES3Q6UWW8 571 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 CMASQ8NFW8 434 aaPredicted RBP9.22□□□□□ -0.93
SNCA-201ENST00000336904 ZC3H15Q8WU90 426 aaKnown RBP9.22□□□□□ -0.93
SNCA-201ENST00000336904 TBC1D31Q96DN5 1066 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 ZIC5Q96T25 663 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 KCNK16Q96T55 309 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 ARHGAP39Q9C0H5 1083 aa9.22□□□□□ -0.93
SNCA-201ENST00000336904 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.22□□□□□ -0.93
SNCA-201ENST00000336904 FAM47DPA6NHR8 397 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 CASTOR2A6NHX0 329 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 KPNA7A9QM74 516 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 METTL18O95568 372 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 DARSP14868 501 aaKnown RBP9.21□□□□□ -0.93
SNCA-201ENST00000336904 TAC1P20366 129 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 CYP2F1P24903 491 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 MLH1P40692 756 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 ERFP50548 548 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 MNAT1P51948 309 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 ARL4CP56559 192 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 INCA1Q0VD86 236 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 TRIM32Q13049 653 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 SPARCL1Q14515 664 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 E2F5Q15329 346 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 TAF1CQ15572 869 aaPredicted RBP9.21□□□□□ -0.93
SNCA-201ENST00000336904 CST9Q5W186 159 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 NOTUMQ6P988 496 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 PPP1R21Q6ZMI0 780 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 DENND5BQ6ZUT9 1274 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 TRPM8Q7Z2W7 1104 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 POLNQ7Z5Q5 900 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 PIGWQ7Z7B1 504 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 FITM2Q8N6M3 262 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 PPM1NQ8N819 430 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 ANKS4BQ8N8V4 417 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 BBOF1Q8ND07 529 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 RNF157Q96PX1 679 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 TMEM237Q96Q45 408 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 SMC6Q96SB8 1091 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 ZNF395Q9H8N7 513 aaPredicted RBP9.21□□□□□ -0.93
SNCA-201ENST00000336904 C2CD2Q9Y426 696 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 IPPQ9Y573 584 aa9.21□□□□□ -0.93
SNCA-201ENST00000336904 USP12O75317 370 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms