RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 DCLRE1AQ6PJP8 1040 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 ECHDC2Q86YB7 292 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 ANKMY2Q8IV38 441 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 KLHDC9Q8NEP7 349 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 TMEM176AQ96HP8 235 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 UBE2OQ9C0C9 1292 aaKnown RBP12.29□□□□□ -0.44
HDAC6-201ENST00000334136 THAP2Q9H0W7 228 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 KIF9Q9HAQ2 790 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 GOLGA2P5Q9HBQ8 144 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 CFLARO15519 480 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 PHF2O75151 1096 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 CDH16O75309 829 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 FGFR1P11362 822 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 CCND1P24385 295 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 RFC1P35251 1148 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-201ENST00000334136 GCNT1Q02742 428 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 MEA1Q16626 185 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 SLC10A6Q3KNW5 377 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 ZCWPW2Q504Y3 356 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 ANKRD20A8PQ5CZ79 823 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 CNKSR3Q6P9H4 555 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 SLC30A9Q6PML9 568 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 ZNF571Q7Z3V5 609 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-201ENST00000334136 SNF8Q96H20 258 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 ZNF512Q96ME7 567 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-201ENST00000334136 TSPAN18Q96SJ8 248 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 SF3B1O75533 1304 aaKnown RBP eCLIP12.29□□□□□ -0.444e-7■■■■■ 110.4
HDAC6-201ENST00000334136 CCDC195A0A1B0GUA6 201 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 TYW5A2RUC4 315 aaKnown RBP12.29□□□□□ -0.44
HDAC6-201ENST00000334136 RTN2O75298 545 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 PIGRP01833 764 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 TARSP26639 723 aaKnown RBP12.29□□□□□ -0.44
HDAC6-201ENST00000334136 ARFIP2P53365 341 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 MEI1Q5TIA1 1274 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 ZNF677Q86XU0 584 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 NPAS4Q8IUM7 802 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 ARHGEF19Q8IW93 802 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 TRABDQ9H4I3 376 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 DLGAP2Q9P1A6 1054 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 DERAQ9Y315 318 aa12.29□□□□□ -0.44
HDAC6-201ENST00000334136 A0A0U1RQF3 1178 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 ABHD14A-ACY1A0A1B0GW23 586 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 MBLAC1A4D2B0 266 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-201ENST00000334136 CDK17Q00537 523 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 KLC1Q07866 573 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 RBM15Q96T37 977 aaKnown RBP eCLIP12.28□□□□□ -0.44
HDAC6-201ENST00000334136 CFHR5Q9BXR6 569 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 SMYD2Q9NRG4 433 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 HAS3O00219 553 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 LRG1P02750 347 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 PPM1AP35813 382 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 GJA8P48165 433 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 COPS2P61201 443 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 WSCD1Q658N2 575 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 DARS2Q6PI48 645 aaKnown RBP12.28□□□□□ -0.44
HDAC6-201ENST00000334136 SH3GL3Q99963 347 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 KATNBL1Q9H079 304 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 WNT8AQ9H1J5 351 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 AGO3Q9H9G7 860 aaKnown RBP12.28□□□□□ -0.44
HDAC6-201ENST00000334136 SLC28A3Q9HAS3 691 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 CYP4F11Q9HBI6 524 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 DMAC2Q9NW81 257 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 SEPT10Q9P0V9 454 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 TUBGCP4Q9UGJ1 667 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 ANGPTL2Q9UKU9 493 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 ARL5CA6NH57 179 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 RALAP11233 206 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 CSF2RAP15509 400 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 RANBP1P43487 201 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 IFI35P80217 286 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-201ENST00000334136 ARL13BQ3SXY8 428 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 TMEM154Q6P9G4 183 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 IRF2BP1Q8IU81 584 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 LRRC52Q8N7C0 313 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 SYN2Q92777 582 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-201ENST00000334136 SLC13A1Q9BZW2 595 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 WDR35Q9P2L0 1181 aa12.28□□□□□ -0.44
HDAC6-201ENST00000334136 DPYSL4O14531 572 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 MCF2LO15068 1137 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 IQCF3P0C7M6 154 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 EN2P19622 333 aaPredicted RBP12.27□□□□□ -0.44
HDAC6-201ENST00000334136 ACO1P21399 889 aaKnown RBP12.27□□□□□ -0.44
HDAC6-201ENST00000334136 KDSRQ06136 332 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 TMED1Q13445 227 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 CRYMQ14894 314 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 MAP3K21Q5TCX8 1036 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 TMEM86AQ8N2M4 240 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 ATG4AQ8WYN0 398 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 BTBD6Q96KE9 485 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 SLITRK1Q96PX8 696 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 DOCK3Q8IZD9 2030 aa12.27□□□□□ -0.44
HDAC6-201ENST00000334136 F8VZ95 297 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 PITPNM1O00562 1244 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 KRT3P12035 628 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 CYP11B1P15538 503 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 NQO1P15559 274 aaKnown RBP12.27□□□□□ -0.45
HDAC6-201ENST00000334136 KLRC2P26717 231 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 RFC2P35250 354 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 ACADSBP45954 432 aa12.27□□□□□ -0.45
HDAC6-201ENST00000334136 BRCC3P46736 316 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms