RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 PSTPIP1O43586 416 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 HSF2BPO75031 334 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 ZBED1O96006 694 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 SSR1P43307 286 aaKnown RBP24.35■■□□□ 1.49
TSEN54-201ENST00000333213 MAGEA11P43364 429 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 RWDD2BP57060 319 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 YWHAZP63104 245 aaKnown RBP24.35■■□□□ 1.49
TSEN54-201ENST00000333213 CDO1Q16878 200 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 DEFB106AQ8N104 65 aa24.35■■□□□ 1.49
TSEN54-201ENST00000333213 MAP2K7O14733 419 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 SASH3O75995 380 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 FBXO21O94952 628 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 SEC31AO94979 1220 aaKnown RBP24.34■■□□□ 1.49
TSEN54-201ENST00000333213 MIPP30301 263 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 PPM1AP35813 382 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 DUSP4Q13115 394 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 ACAP1Q15027 740 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 SYPL2Q5VXT5 272 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 FAM109BQ6ICB4 259 aaPredicted RBP24.34■■□□□ 1.49
TSEN54-201ENST00000333213 SPRED2Q7Z698 418 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 ANKS1BQ7Z6G8 1248 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 KLHL23Q8NBE8 558 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 DDX23Q9BUQ8 820 aaKnown RBP24.34■■□□□ 1.49
TSEN54-201ENST00000333213 AAASQ9NRG9 546 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.34■■□□□ 1.49
TSEN54-201ENST00000333213 RNF14Q9UBS8 474 aa24.34■■□□□ 1.49
TSEN54-201ENST00000333213 ARHGEF15O94989 841 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 DNAJB2P25686 324 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 SDC4P31431 198 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 GJC1P36383 396 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 PGFP49763 221 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 PITX1P78337 314 aaPredicted RBP24.33■■□□□ 1.49
TSEN54-201ENST00000333213 CCDC181Q5TID7 509 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 CYP4V2Q6ZWL3 525 aaPredicted RBP24.33■■□□□ 1.49
TSEN54-201ENST00000333213 NOA1Q8NC60 698 aaKnown RBP24.33■■□□□ 1.49
TSEN54-201ENST00000333213 SPATA4Q8NEY3 305 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 SPPL2BQ8TCT7 592 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 GPR152Q8TDT2 470 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 ACSF2Q96CM8 615 aaPredicted RBP24.33■■□□□ 1.49
TSEN54-201ENST00000333213 C8orf48Q96LL4 319 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 PEBP4Q96S96 227 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 KLHL11Q9NVR0 708 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 ASNSD1Q9NWL6 643 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 CTAGE15A4D2H0 777 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 CTAGE8P0CG41 777 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 MYOGP15173 224 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 MATKP42679 507 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 ATXN1P54253 815 aaKnown RBP24.33■■□□□ 1.49
TSEN54-201ENST00000333213 CKAP4Q07065 602 aaKnown RBP24.33■■□□□ 1.49
TSEN54-201ENST00000333213 SMC1AQ14683 1233 aaKnown RBP24.33■■□□□ 1.49
TSEN54-201ENST00000333213 OTUD1Q5VV17 481 aaPredicted RBP24.33■■□□□ 1.49
TSEN54-201ENST00000333213 CTAGE6Q86UF2 777 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 CTAGE4Q8IX94 777 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 CENPIQ92674 756 aaPredicted RBP24.33■■□□□ 1.49
TSEN54-201ENST00000333213 SLC2A13Q96QE2 648 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.33■■□□□ 1.49
TSEN54-201ENST00000333213 TTC7AQ9ULT0 858 aaPredicted RBP24.33■■□□□ 1.49
TSEN54-201ENST00000333213 NAALADL1Q9UQQ1 740 aa24.33■■□□□ 1.49
TSEN54-201ENST00000333213 CARNS1A5YM72 827 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 GRXCR1A8MXD5 290 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 LILRB3O75022 631 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 ERLIN1O75477 346 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 GLI1P08151 1106 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 MAGEA10P43363 369 aaPredicted RBP24.32■■□□□ 1.48
TSEN54-201ENST00000333213 PTPN9P43378 593 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 HDAC4P56524 1084 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 SMARCB1Q12824 385 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 IFRD2Q12894 506 aaPredicted RBP24.32■■□□□ 1.48
TSEN54-201ENST00000333213 LLGL1Q15334 1064 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 MGAT5BQ3V5L5 792 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 KCNT1Q5JUK3 1230 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 LRRC38Q5VT99 294 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 KATNAL2Q8IYT4 538 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 SCML4Q8N228 414 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 FAM172AQ8WUF8 416 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 POPDC2Q9HBU9 364 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 PCSK1NQ9UHG2 260 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 NR2E1Q9Y466 385 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 PLXNA4Q9HCM2 1894 aa24.32■■□□□ 1.48
TSEN54-201ENST00000333213 COL4A4P53420 1690 aaPredicted RBP24.32■■□□□ 1.48
TSEN54-201ENST00000333213 DAB1O75553 588 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 RNF8O76064 485 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 FGGP02679 453 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 HAPLN1P10915 354 aaPredicted RBP24.31■■□□□ 1.48
TSEN54-201ENST00000333213 PCK1P35558 622 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 PAFAH1B1P43034 410 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 USP46P62068 366 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 C2orf54Q08AI8 447 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 LONRF2Q1L5Z9 754 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 SMTNL2Q2TAL5 461 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 DCAF6Q58WW2 860 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 ZDHHC14Q8IZN3 488 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 NT5C3BQ969T7 300 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 HERPUD2Q9BSE4 406 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 ZBP1Q9H171 429 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 NGRNQ9NPE2 291 aaKnown RBP24.31■■□□□ 1.48
TSEN54-201ENST00000333213 USP18Q9UMW8 372 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.31■■□□□ 1.48
TSEN54-201ENST00000333213 TRIM66O15016 1216 aa24.31■■□□□ 1.48
TSEN54-201ENST00000333213 ABLIM3O94929 683 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms