RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 DNTTIP2Q5QJE6 756 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 LILRA6Q6PI73 481 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 DENND5BQ6ZUT9 1274 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 FAM149B1Q96BN6 582 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 TTLL2Q9BWV7 592 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 TLR10Q9BXR5 811 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 INSL5Q9Y5Q6 135 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 SLC38A8A6NNN8 435 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 YJEFN3A6XGL0 299 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 E7ENQ6 273 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 PRRG1O14668 218 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 ENC1O14682 589 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 NCK2O43639 380 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 SPOPO43791 374 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 PDGFRAP16234 1089 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 CTNNA2P26232 953 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 KLRC2P26717 231 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 IRS1P35568 1242 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 PTPN9P43378 593 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 USP46P62068 366 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 PLD1Q13393 1074 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 ACAP1Q15027 740 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 PAPD7Q5XG87 772 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 CHRDL2Q6WN34 429 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 BEND5Q7L4P6 421 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 STKLD1Q8NE28 680 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 MICAL1Q8TDZ2 1067 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 ARNTL2Q8WYA1 636 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 GOLGA1Q92805 767 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 CD101Q93033 1021 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 TIFAQ96CG3 184 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 HES6Q96HZ4 224 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 DDX23Q9BUQ8 820 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 CERS4Q9HA82 394 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 POPDC2Q9HBU9 364 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 HYOU1Q9Y4L1 999 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 MIF4GDA9UHW6 222 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 CSPG5O95196 566 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 GLUD1P00367 558 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 DESP17661 470 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 YWHAQP27348 245 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 SDC4P31431 198 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 MATKP42679 507 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 ALDH1A3P47895 512 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 IFRD2Q12894 506 aaPredicted RBP10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 RPS6KA1Q15418 735 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 CCDC14Q49A88 953 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 CCDC149Q6ZUS6 474 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 HFE2Q6ZVN8 426 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 CPNE8Q86YQ8 564 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 ARHGAP18Q8N392 663 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 GPR152Q8TDT2 470 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 GIPC2Q8TF65 315 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 EHD2Q9NZN4 543 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 MTCL1Q9Y4B5 1905 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 NOS2P35228 1153 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 CLCN4P51793 760 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 YWHAGP61981 247 aaKnown RBP eCLIP10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 VEPH1Q14D04 833 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 PTPROQ16827 1216 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 DEFB106AQ8N104 65 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 GDPD5Q8WTR4 605 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 FBXO32Q969P5 355 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 CFAP57Q96MR6 1250 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 PACSIN2Q9UNF0 486 aaPredicted RBP10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 USTQ9Y2C2 406 aa10.72□□□□□ -0.69
VIPAS39-201ENST00000327028 DDX3YO15523 660 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 FYNP06241 537 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 CSH1P0DML2 217 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 CSH2P0DML3 217 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 CTNNA1P35221 906 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 EPHB3P54753 998 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 AMPD2Q01433 879 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 TWF1Q12792 350 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 MTMR3Q13615 1198 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 RTL10Q7L3V2 364 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 SCD5Q86SK9 330 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 KREMEN2Q8NCW0 462 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 TRMT2BQ96GJ1 504 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 NCAPGQ9BPX3 1015 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 RRN3Q9NYV6 651 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 GMIPQ9P107 970 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 STAP1Q9ULZ2 295 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 SNX12Q9UMY4 172 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 CCDC66A2RUB6 948 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 EPOPA6NHQ4 379 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 PSTPIP1O43586 416 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 CLASP2O75122 1294 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 LRCH4O75427 683 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 RNF8O76064 485 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 PCK1P35558 622 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 C15orf59Q2T9L4 293 aaPredicted RBP10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 SLC25A52Q3SY17 297 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 DCAF6Q58WW2 860 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 BSPRYQ5W0U4 402 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 CC2D1AQ6P1N0 951 aaPredicted RBP10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 MON1AQ86VX9 555 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 SLC7A14Q8TBB6 771 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 OVCA2Q8WZ82 227 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms