RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 DPP10Q8N608 796 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 B3GALNT2Q8NCR0 500 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 TNIP2Q8NFZ5 429 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 TRAPPC9Q96Q05 1148 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 PCDHB8Q9UN66 801 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 PVALEFA0A1B0GWK0 134 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 GOLGA8TH3BQL2 631 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 TK2O00142 265 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 DYNC1LI2O43237 492 aaPredicted RBP8.15□□□□□ -1.11
CIITA-201ENST00000324288 RGS20O76081 388 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 KRT6AP02538 564 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 KRT6BP04259 564 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 RAP1GAPP47736 663 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 KRT6CP48668 564 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 ERVK-24P63145 666 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 CARTPTQ16568 116 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 ZNF284Q2VY69 593 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 NACC2Q96BF6 587 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 CEP44Q9C0F1 390 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 TMCC3Q9ULS5 477 aa8.15□□□□□ -1.11
CIITA-201ENST00000324288 AREL1O15033 823 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 AQP5P55064 265 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 GEMIN4P57678 1058 aaKnown RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 MED15Q96RN5 788 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 PAK5Q9P286 719 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 MAGI2Q86UL8 1455 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 FCHO1O14526 889 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 NUDT18Q6ZVK8 323 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 KYQ8NBH2 561 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 APOL2Q9BQE5 337 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 POLE3Q9NRF9 147 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 R3HDM2Q9Y2K5 976 aaKnown RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 PYDC2Q56P42 97 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 TYW3Q6IPR3 259 aaKnown RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 CTNNAL1Q9UBT7 734 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 ITIH2P19823 946 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 RNASE12Q5GAN4 147 aaKnown RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 GNG14A0A1W2PPG7 69 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 INPP4BO15327 924 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 ALDH1A2O94788 518 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 LTFP02788 710 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 SLC1A1P43005 524 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 RGS4P49798 205 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 SEZ6Q53EL9 994 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 TBCELQ5QJ74 424 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 APOBEC3FQ8IUX4 373 aaKnown RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 CARNMT1Q8N4J0 409 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 PPP2R3CQ969Q6 453 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 PRKAB1Q9Y478 270 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 LCA5LO95447 670 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 ALDH9A1P49189 494 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 RBP5P82980 135 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 PRKCEQ02156 737 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 DGCR6Q14129 220 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 FAM20AQ96MK3 541 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 COPS7BQ9H9Q2 264 aaPredicted RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 COL15A1P39059 1388 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 SH3BGRLO75368 114 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 TFRCP02786 760 aaKnown RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 GPC1P35052 558 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 DDR2Q16832 855 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 NYAP1Q6ZVC0 841 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 C19orf60Q96EN9 201 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 FRMD6Q96NE9 622 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 RSPH9Q9H1X1 276 aaPredicted RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 OSGEPL1Q9H4B0 414 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 SCUBE2Q9NQ36 999 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 EIF2S1P05198 315 aaKnown RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 YWHAZP63104 245 aaKnown RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 SEL1L3Q68CR1 1132 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 TRIM65Q6PJ69 517 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 CYP2R1Q6VVX0 501 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 NECAB2Q7Z6G3 386 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 MB21D2Q8IYB1 491 aaPredicted RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 TPCN2Q8NHX9 752 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 CD209Q9NNX6 404 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 GPATCH2LQ9NWQ4 482 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 PIH1D1Q9NWS0 290 aaKnown RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 CLIC5Q9NZA1 410 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 TMEM2Q9UHN6 1383 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 KBTBD13C9JR72 458 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 KRT36O76013 467 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 CYP2B6P20813 491 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 KCNJ2P63252 427 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 DCTN2Q13561 401 aaKnown RBP8.14□□□□□ -1.11
CIITA-201ENST00000324288 UBXN6Q9BZV1 441 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 COPG2Q9UBF2 871 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 ZFYVE16Q7Z3T8 1539 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 NPC1L1Q9UHC9 1359 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 DOCK10Q96BY6 2186 aa8.14□□□□□ -1.11
CIITA-201ENST00000324288 ERVV-1B6SEH8 477 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 PSMD14O00487 310 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 ZBTB11O95625 1053 aaPredicted RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 GTF2H1P32780 548 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 ZNF772Q68DY9 489 aaPredicted RBP8.13□□□□□ -1.11
CIITA-201ENST00000324288 WDR60Q8WVS4 1066 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 CHID1Q9BWS9 393 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 MYLK2Q9H1R3 596 aa8.13□□□□□ -1.11
CIITA-201ENST00000324288 EHD3Q9NZN3 535 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms