RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 MICAL2O94851 1124 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 UPP2O95045 317 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 S100A5P33763 92 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 PTPN11Q06124 597 aaPredicted RBP11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 ZNF844Q08AG5 666 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 SEL1L3Q68CR1 1132 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 TMCO5AQ8N6Q1 288 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 COLGALT1Q8NBJ5 622 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 CLCA2Q9UQC9 943 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 F5H5T6 163 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 F9P00740 461 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 TNFRSF8P28908 595 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 ATP6V1E1P36543 226 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 SV2AQ7L0J3 742 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 ATXN2LQ8WWM7 1075 aaKnown RBP11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 ZNF333Q96JL9 665 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 CRLS1Q9UJA2 301 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 DAB1O75553 588 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 SOAT1P35610 550 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 TRPC1P48995 793 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 SLC11A2P49281 568 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 CACHD1Q5VU97 1274 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 TTC33Q6PID6 262 aaPredicted RBP11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 ZFYVE19Q96K21 471 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 NR1H4Q96RI1 486 aaPredicted RBP11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 SEMA4AQ9H3S1 761 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 BLOC1S4Q9NUP1 217 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 NINJ2Q9NZG7 142 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 ZNF177Q13360 481 aaPredicted RBP11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 EMC1Q8N766 993 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 SLITRK1Q96PX8 696 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 PDCD2LQ9BRP1 358 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 KLHL4Q9C0H6 718 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 MROH8Q9H579 483 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 SEPT3Q9UH03 358 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 UBOX5O94941 541 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 CXCL8P10145 99 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 PYGMP11217 842 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 SLC26A2P50443 739 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 CCDC85BQ15834 202 aaPredicted RBP11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 MTMR9Q96QG7 549 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 EFCAB1Q9HAE3 211 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 MST1RQ04912 1400 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 SERPINB3P29508 390 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 THPOP40225 353 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 BTKQ06187 659 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 GRTP1Q5TC63 336 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 DENND1BQ6P3S1 775 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 ADCK2Q7Z695 626 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 SELENONQ9NZV5 590 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 DSEQ9UL01 958 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 FER1L4A9Z1Z3 1794 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 SUPT7LO94864 414 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 TFE3P19532 575 aaPredicted RBP11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 GLRBP48167 497 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 LHX1P48742 406 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 LRRC74AQ0VAA2 488 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 HDAC7Q8WUI4 952 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 SHOC2Q9UQ13 582 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 ITM2BQ9Y287 266 aa11.26□□□□□ -0.61
SNRNP200-201ENST00000323853 NCF1BA6NI72 391 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 NCF1CA8MVU1 366 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 SLCO1B7G3V0H7 640 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 ALBP02768 609 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 NCF1P14598 390 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 ACO1P21399 889 aaKnown RBP11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 SLC30A10Q6XR72 485 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 HS6ST3Q8IZP7 471 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 CENPLQ8N0S6 344 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 ECSITQ9BQ95 431 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 COLEC11Q9BWP8 271 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 DDX3XO00571 662 aaKnown RBP eCLIP11.25□□□□□ -0.614e-14■■■■□ 26.1
SNRNP200-201ENST00000323853 SASH3O75995 380 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 SLC15A2Q16348 729 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 PLEKHH3Q7Z736 793 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 DDI1Q8WTU0 396 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 SPIRE2Q8WWL2 714 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 SPATA16Q9BXB7 569 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 ATP11BQ9Y2G3 1177 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 SIK3Q9Y2K2 1263 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 COL5A2P05997 1499 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 STX7O15400 261 aaKnown RBP11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 PGAM1P18669 254 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 MZF1P28698 734 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 SLC1A6P48664 564 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 ZSCAN5CA6NGD5 496 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 EVPLLA8MZ36 301 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 CFAP99D6REC4 459 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 EFCAB14O75071 495 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 CPA3P15088 417 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 GRK2P25098 689 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 DSG3P32926 999 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 RGS2P41220 211 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 BMPR2Q13873 1038 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 MTFR1Q15390 333 aa11.25□□□□□ -0.61
SNRNP200-201ENST00000323853 GALNTL6Q49A17 601 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms