RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ATP6V1G2O95670 118 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 IL4RP24394 825 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 ALDH3A1P30838 453 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 GCLCP48506 637 aaPredicted RBP23.28■■□□□ 1.32
PNKP-201ENST00000322344 ATP11AP98196 1134 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 DGKDQ16760 1214 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 DPY19L2Q6NUT2 758 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 ACOT1Q86TX2 421 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 KLHL29Q96CT2 875 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 CD248Q9HCU0 757 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 PNPLA8Q9NP80 782 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 MORF4L1Q9UBU8 362 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 IKBKGQ9Y6K9 419 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 PLXNB2O15031 1838 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 UNCXA6NJT0 531 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 ATP5HO75947 161 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 ALADP13716 330 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 ZBTB6Q15916 424 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 RAB6CQ53S08 254 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 PQLC3Q8N755 202 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 RAB6CQ9H0N0 254 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 ADAMTS10Q9H324 1103 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 SNTG2Q9NY99 539 aa23.28■■□□□ 1.32
PNKP-201ENST00000322344 PDHXO00330 501 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 KCNN4O15554 427 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 DCTN3O75935 186 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 ZBED1O96006 694 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 CCNB1P14635 433 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 SCNN1AP37088 669 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 MAGEA6P43360 314 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 ZNF200P98182 395 aaPredicted RBP23.27■■□□□ 1.32
PNKP-201ENST00000322344 C9orf131Q5VYM1 1079 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 BANPQ8N9N5 519 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 OR6J1Q8NGC5 347 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 ZNF75CPQ92670 426 aaPredicted RBP23.27■■□□□ 1.32
PNKP-201ENST00000322344 KHSRPQ92945 711 aaKnown RBP eCLIP23.27■■□□□ 1.32
PNKP-201ENST00000322344 SNRNP25Q9BV90 132 aaKnown RBP23.27■■□□□ 1.32
PNKP-201ENST00000322344 ARHGEF3Q9NR81 526 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 TXLNGQ9NUQ3 528 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 RALGAPA2Q2PPJ7 1873 aa23.27■■□□□ 1.32
PNKP-201ENST00000322344 TOMM70O94826 608 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 MT-ND3P03897 115 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 SMPD1P17405 629 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 HOXA11P31270 313 aaPredicted RBP23.26■■□□□ 1.31
PNKP-201ENST00000322344 PTPN9P43378 593 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 ASRGL1Q7L266 308 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 CATSPER4Q7RTX7 472 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 FAM228AQ86W67 206 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 CDKL3Q8IVW4 592 aaPredicted RBP23.26■■□□□ 1.31
PNKP-201ENST00000322344 SLC44A1Q8WWI5 657 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 SPOCK2Q92563 424 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 DNAI2Q9GZS0 605 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 KLC2Q9H0B6 622 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 VPS11Q9H270 941 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 RAB6BQ9NRW1 208 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 CITO14578 2027 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 KBTBD13C9JR72 458 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 IGF2BP3O00425 579 aaKnown RBP eCLIP23.26■■□□□ 1.31
PNKP-201ENST00000322344 PAPSS1O43252 624 aaPredicted RBP23.26■■□□□ 1.31
PNKP-201ENST00000322344 KIZQ2M2Z5 673 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 NOTUMQ6P988 496 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 ARCQ7LC44 396 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 DPP9Q86TI2 863 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 PNMA8AQ86V59 439 aaPredicted RBP23.26■■□□□ 1.31
PNKP-201ENST00000322344 IGDCC3Q8IVU1 814 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 PCDH19Q8TAB3 1148 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 ZNF398Q8TD17 642 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 ZMAT2Q96NC0 199 aaKnown RBP23.26■■□□□ 1.31
PNKP-201ENST00000322344 NOD2Q9HC29 1040 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 CYLDQ9NQC7 956 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 FAM49BQ9NUQ9 324 aa23.26■■□□□ 1.31
PNKP-201ENST00000322344 TCRBV9S1A1TA0A576 114 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 ECM2O94769 699 aaPredicted RBP23.25■■□□□ 1.31
PNKP-201ENST00000322344 ZFXP17010 805 aaPredicted RBP23.25■■□□□ 1.31
PNKP-201ENST00000322344 NRLP54845 237 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 YWHAGP61981 247 aaKnown RBP eCLIP23.25■■□□□ 1.31
PNKP-201ENST00000322344 FYB2Q5VWT5 728 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 IQSEC1Q6DN90 963 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 ABHD16BQ9H3Z7 469 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 SLCO1B3Q9NPD5 702 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 GPATCH2LQ9NWQ4 482 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 CNTN3Q9P232 1028 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 CAPN15O75808 1086 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 UNC5CO95185 931 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 INHBAP08476 426 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 KCNJ2P63252 427 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 PTK7Q13308 1070 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 SPDYAQ5MJ70 313 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 SCUBE3Q8IX30 993 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 OR6B3Q8NGW1 331 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 TCP10LQ8TDR4 215 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 TUBGCP4Q9UGJ1 667 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 UBQLN1Q9UMX0 589 aaKnown RBP23.25■■□□□ 1.31
PNKP-201ENST00000322344 HEY1Q9Y5J3 304 aa23.25■■□□□ 1.31
PNKP-201ENST00000322344 PPEF2O14830 753 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 GSTA2P09210 222 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 RBL1P28749 1068 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 HDAC4P56524 1084 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 SLC26A9Q7LBE3 791 aa23.24■■□□□ 1.31
PNKP-201ENST00000322344 ANKLE1Q8NAG6 615 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms