RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 IQCKQ8N0W5 287 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 ATP6V1E2Q96A05 226 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 TSPYL2Q9H2G4 693 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-201ENST00000321105 TULP2O00295 520 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 MSCO60682 206 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 AVPR1AP37288 418 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 YWHAZP63104 245 aaKnown RBP11.42□□□□□ -0.58
TOP3A-201ENST00000321105 NSUN2Q08J23 767 aaKnown RBP eCLIP11.42□□□□□ -0.58
TOP3A-201ENST00000321105 EFEMP1Q12805 493 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 ARID3BQ8IVW6 561 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-201ENST00000321105 UNC45BQ8IWX7 931 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 EFHBQ8N7U6 833 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 RAB3IL1Q8TBN0 382 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 DTX3LQ8TDB6 740 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 SLITRK1Q96PX8 696 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 LGMNQ99538 433 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 NTPCRQ9BSD7 190 aaKnown RBP11.42□□□□□ -0.58
TOP3A-201ENST00000321105 RNF39Q9H2S5 420 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 DPEP3Q9H4B8 488 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 C20orf96Q9NUD7 363 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-201ENST00000321105 GTSE1Q9NYZ3 720 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 IL1RAPL1Q9NZN1 696 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 ITGA11Q9UKX5 1188 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 STRCQ7RTU9 1775 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 KBTBD13C9JR72 458 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 SYDE1Q6ZW31 735 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-201ENST00000321105 TFB1MQ8WVM0 346 aaKnown RBP11.42□□□□□ -0.58
TOP3A-201ENST00000321105 WHRNQ9P202 907 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 ST3GAL5Q9UNP4 418 aa11.42□□□□□ -0.58
TOP3A-201ENST00000321105 USP15Q9Y4E8 981 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-201ENST00000321105 A0A0G2JLL6 359 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 APOEP02649 317 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 PYGBP11216 843 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 AKR1A1P14550 325 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 YBX3P16989 372 aaKnown RBP eCLIP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 LMO2P25791 158 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 BST2Q10589 180 aaKnown RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 ANO4Q32M45 955 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 ACCSLQ4AC99 568 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 PRRT2Q7Z6L0 340 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 CTU1Q7Z7A3 348 aaKnown RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 CYP3A43Q9HB55 503 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 SLC38A7Q9NVC3 462 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 SMPD4Q9NXE4 827 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 SLC39A10Q9ULF5 831 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 CITO14578 2027 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 OR4Q2P0C623 313 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 STIP1P31948 543 aaKnown RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 CDC42EP1Q00587 391 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 DUSP28Q4G0W2 176 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 PMF1Q6P1K2 205 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 TAS1R3Q7RTX0 852 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 RNF180Q86T96 592 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 WDR75Q8IWA0 830 aaKnown RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 ATPAF2Q8N5M1 289 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 STKLD1Q8NE28 680 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 GABPB2Q8TAK5 448 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 GTF3C2Q8WUA4 911 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 RUBCNQ92622 972 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 SNRNP25Q9BV90 132 aaKnown RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 NCANO14594 1321 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 CACNA1SQ13698 1873 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 TJP1Q07157 1748 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 ATP8B3O60423 1300 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 ENO1P06733 434 aaKnown RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 TARSP26639 723 aaKnown RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 GEMIN4P57678 1058 aaKnown RBP11.41□□□□□ -0.58
TOP3A-201ENST00000321105 OVOS1Q6IE37 1185 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 TRPM8Q7Z2W7 1104 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 IFT43Q96FT9 208 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 MAML3Q96JK9 1138 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 TSSK1BQ9BXA7 367 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 PSD3Q9NYI0 1048 aa11.41□□□□□ -0.58
TOP3A-201ENST00000321105 TMEM191CA6NGB0 347 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 C3orf70A6NLC5 250 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-201ENST00000321105 CLGNO14967 610 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 MT-CO1P00395 513 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 ZFXP17010 805 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-201ENST00000321105 RPL22P35268 128 aaKnown RBP11.4□□□□□ -0.58
TOP3A-201ENST00000321105 RTP1P59025 263 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 COPS2P61201 443 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 MAP2K5Q13163 448 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 ZNF268Q14587 947 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-201ENST00000321105 CNGA2Q16280 664 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 NBPF20Q3BBV1 942 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 ZCCHC23Q6ZST2 131 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 CHSY1Q86X52 802 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 CLEC4CQ8WTT0 213 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 C12orf42Q96LP6 360 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 RPRD1AQ96P16 312 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-201ENST00000321105 PCYT2Q99447 389 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 NIFKQ9BYG3 293 aaKnown RBP11.4□□□□□ -0.58
TOP3A-201ENST00000321105 PDZD7Q9H5P4 517 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 RPTORQ8N122 1335 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 NRCAMQ92823 1304 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 SIGLEC16A6NMB1 481 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 DNALI1O14645 258 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-201ENST00000321105 LRCH4O75427 683 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 HAUS5O94927 633 aa11.4□□□□□ -0.58
TOP3A-201ENST00000321105 MMP3P08254 477 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms