RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 B4GALT3O60512 393 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 PPFIA2O75334 1257 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 APOC2P02655 101 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 ITGB1P05556 798 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 IVDP26440 423 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 DAOAP59103 153 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 HSP90B2PQ58FF3 399 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 ERMARDQ5T6L9 678 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 C4orf50Q6ZRC1 276 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 HSPH1Q92598 858 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 ACSF2Q96CM8 615 aaPredicted RBP18.63■□□□□ 0.57
RAB39A-201ENST00000320578 MRPL9Q9BYD2 267 aaKnown RBP18.63■□□□□ 0.57
RAB39A-201ENST00000320578 TRIM31Q9BZY9 425 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 TSPYL1Q9H0U9 437 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 HIPK3Q9H422 1215 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 POPDC2Q9HBU9 364 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.63■□□□□ 0.57
RAB39A-201ENST00000320578 STAP1Q9ULZ2 295 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 CST8O60676 142 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 CDH6P55285 790 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 FAAP100Q0VG06 881 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 CALCOCO2Q13137 446 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 DPYSL3Q14195 570 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 CDO1Q16878 200 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 PAN2Q504Q3 1202 aaKnown RBP18.63■□□□□ 0.57
RAB39A-201ENST00000320578 PM20D1Q6GTS8 502 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 LRIG3Q6UXM1 1119 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 ZNF365Q70YC5 407 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 BEND5Q7L4P6 421 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 TMC3Q7Z5M5 1100 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 DEFB106AQ8N104 65 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 ALLCQ8N6M5 410 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 OR10T2Q8NGX3 314 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 FAF2Q96CS3 445 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 SNF8Q96H20 258 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 NPY6RQ99463 290 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 ZNF670Q9BS34 389 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 TMEM175Q9BSA9 504 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 DMAP1Q9NPF5 467 aaPredicted RBP18.63■□□□□ 0.57
RAB39A-201ENST00000320578 LRFN2Q9ULH4 789 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 AGPSO00116 658 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 CAPN2P17655 700 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 KLRC2P26717 231 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 OR1G1P47890 313 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 PLTPP55058 493 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 DPYSL2Q16555 572 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 CFAP58Q5T655 872 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 NPAS4Q8IUM7 802 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 ANKLE1Q8NAG6 615 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 CCDC114Q96M63 670 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 RNF157Q96PX1 679 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 SLC9A7Q96T83 725 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 SH3GL2Q99962 352 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 TRIM62Q9BVG3 475 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 COLEC11Q9BWP8 271 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 MAK16Q9BXY0 300 aaKnown RBP18.62■□□□□ 0.57
RAB39A-201ENST00000320578 DNPEPQ9ULA0 475 aa18.62■□□□□ 0.57
RAB39A-201ENST00000320578 OPA1O60313 960 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 CD48P09326 243 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 AIF1P55008 147 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 SCYL2Q6P3W7 929 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 RFX6Q8HWS3 928 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 DCP1BQ8IZD4 617 aaKnown RBP18.61■□□□□ 0.57
RAB39A-201ENST00000320578 FBXO25Q8TCJ0 367 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 HASPINQ8TF76 798 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 PGAP3Q96FM1 320 aaPredicted RBP18.61■□□□□ 0.57
RAB39A-201ENST00000320578 ZNF333Q96JL9 665 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 SNRNP25Q9BV90 132 aaKnown RBP18.61■□□□□ 0.57
RAB39A-201ENST00000320578 ULBP1Q9BZM6 244 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 ZCWPW1Q9H0M4 648 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 NRDE2Q9H7Z3 1164 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 PCDH18Q9HCL0 1135 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 RCOR3Q9P2K3 495 aaPredicted RBP18.61■□□□□ 0.57
RAB39A-201ENST00000320578 ASIC3Q9UHC3 531 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 USP3Q9Y6I4 520 aa18.61■□□□□ 0.57
RAB39A-201ENST00000320578 TADA2AO75478 443 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 ZBED1O96006 694 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 ATF2P15336 505 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 IL4RP24394 825 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 OAS2P29728 719 aaKnown RBP18.6■□□□□ 0.57
RAB39A-201ENST00000320578 RFC2P35250 354 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 NDUFV1P49821 464 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 CBX1P83916 185 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 TLE2Q04725 743 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 MRPL58Q14197 206 aaKnown RBP18.6■□□□□ 0.57
RAB39A-201ENST00000320578 KRT81Q14533 505 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 SLMAPQ14BN4 828 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 RAB6CQ53S08 254 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 RHBDF2Q6PJF5 856 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 LRRTM3Q86VH5 581 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 ACTL9Q8TC94 416 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 FAM149B1Q96BN6 582 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 FUBP3Q96I24 572 aaKnown RBP eCLIP18.6■□□□□ 0.57
RAB39A-201ENST00000320578 KCNK16Q96T55 309 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 CALN1Q9BXU9 219 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 FOXP3Q9BZS1 431 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 RAB6CQ9H0N0 254 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 ZNF148Q9UQR1 794 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.6■□□□□ 0.57
RAB39A-201ENST00000320578 H3BQF6 201 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 269.6 ms