RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PPFIBP2Q8ND30 876 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 GOLGA8RI6L899 631 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 SMIM10L2AP0DMW4 78 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 SMIM10L2BP0DMW5 78 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 NSFP46459 744 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 PDIA2Q13087 525 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 ZRSR2Q15696 482 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 RINLQ6ZS11 566 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 NSL1Q96IY1 281 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 KLF6Q99612 283 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 ZCWPW1Q9H0M4 648 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 CXCL16Q9H2A7 254 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 SLC24A2Q9UI40 661 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 TRPM7Q96QT4 1865 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 MYADML2A6NDP7 307 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 GOLGA8SH3BPF8 625 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 GOLGA8MH3BSY2 632 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 SMAPO00193 183 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 LIASO43766 372 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 AOC2O75106 756 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 TJP3O95049 919 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 HOXC6P09630 235 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 SERPINB3P29508 390 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 KATNAL2Q8IYT4 538 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 TCP10LQ8TDR4 215 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 TRAPPC9Q96Q05 1148 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 TRIM55Q9BYV6 548 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 SYNCQ9H7C4 482 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 GSTA2P09210 222 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 HOXD8P13378 290 aaPredicted RBP17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 ATF7P17544 494 aaPredicted RBP17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 RGS2P41220 211 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 ARFIP2P53365 341 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 TRIM32Q13049 653 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 ATP13A4Q4VNC1 1196 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 ZNF394Q53GI3 561 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 TMEM270Q6UE05 265 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 RFX8Q6ZV50 586 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 CCNJLQ8IV13 435 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 TRPV1Q8NER1 839 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 PTPRN2Q92932 1015 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 C11orf70Q9BRQ4 267 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 SIP14410 1827 aa17.92■□□□□ 0.46
SCAMP4-201ENST00000316097 GCNT1Q02742 428 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 CENPUQ71F23 418 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 LRRC6Q86X45 466 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 PASD1Q8IV76 773 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 HAUS1Q96CS2 278 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 PDZD7Q9H5P4 517 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 SLC17A7Q9P2U7 560 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 TNFSF13BQ9Y275 285 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 WASF2Q9Y6W5 498 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 MAGEA13PA6NCF6 341 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 ALOX15BO15296 676 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 MAP3K7O43318 606 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 STAG3L1P0CL83 205 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 PSMC4P43686 418 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 GEMIN4P57678 1058 aaKnown RBP17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 AP1B1Q10567 949 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 NFX1Q12986 1120 aaKnown RBP17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 KBTBD2Q8IY47 623 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 ZNF276Q8N554 614 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 PDCD7Q8N8D1 485 aaKnown RBP17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 EXD1Q8NHP7 514 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 CFAP61Q8NHU2 1237 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 TRIM11Q96F44 468 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 MANSC1Q9H8J5 431 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 PRMT7Q9NVM4 692 aaPredicted RBP17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 TAS2R1Q9NYW7 299 aa17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 STX18Q9P2W9 335 aaKnown RBP17.91■□□□□ 0.46
SCAMP4-201ENST00000316097 TREHO43280 583 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 NFICP08651 508 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 KRT19P08727 400 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 UBTFL6P0CB48 400 aaPredicted RBP17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 ESRRAP11474 423 aaPredicted RBP17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 SERPINB4P48594 390 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 CUL2Q13617 745 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 THOC5Q13769 683 aaKnown RBP17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 MORF4L2Q15014 288 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 EFHC2Q5JST6 749 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 SCARA5Q6ZMJ2 495 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 OSMRQ99650 979 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 TUBB6Q9BUF5 446 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 TSSK1BQ9BXA7 367 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 PCDHB4Q9Y5E5 795 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 A0A1B0GVG6 124 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 C2orf71A6NGG8 1288 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 LACTBL1A8MY62 500 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 IFNB1P01574 187 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 WEE2P0C1S8 567 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 ACO1P21399 889 aaKnown RBP17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 GPX6P59796 221 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 MFSD10Q14728 455 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 WDR49Q8IV35 697 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 ALLCQ8N6M5 410 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 DNAJB3Q8WWF6 145 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 GATA6Q92908 595 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 APBA2Q99767 749 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms