RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 APPL2Q8NEU8 664 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 SLITRK1Q96PX8 696 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 MTG1Q9BT17 334 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 CNOT10Q9H9A5 744 aaKnown RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 SLCO1B3Q9NPD5 702 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 FAM105AQ9NUU6 356 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 RASAL2Q9UJF2 1139 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 PCDHGC3Q9UN70 934 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 ARL5CA6NH57 179 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 CYB561D2O14569 222 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 TP73O15350 636 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 SEPT4O43236 478 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 PAPSS1O43252 624 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 LSM8O95777 96 aaKnown RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 PDHA1P08559 390 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 BRAFP15056 766 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 TARSP26639 723 aaKnown RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 SLC1A1P43005 524 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 TM4SF4P48230 202 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 ITGA8P53708 1063 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 MRPS6P82932 125 aaKnown RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 TMED2Q15363 201 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 SMAD1Q15797 465 aaKnown RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 CA9Q16790 459 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 DEFB115Q30KQ5 88 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 PPP1R15BQ5SWA1 713 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 TLDC1Q6P9B6 456 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 VSTM1Q6UX27 236 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 PIGWQ7Z7B1 504 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 SH3TC2Q8TF17 1288 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 SEC14L1Q92503 715 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 TGS1Q96RS0 853 aaKnown RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 ADAM2Q99965 735 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 PLVAPQ9BX97 442 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 DCLK3Q9C098 648 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 YIPF3Q9GZM5 350 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 SNX25Q9H3E2 840 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 AAASQ9NRG9 546 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 MTRF1LQ9UGC7 380 aaKnown RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 USP18Q9UMW8 372 aa7.95□□□□□ -1.14
TRIM55-202ENST00000315962 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.95□□□□□ -1.14
TRIM55-202ENST00000315962 TRIP11Q15643 1979 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 WDR91A4D1P6 747 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 SIGLEC16A6NMB1 481 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 HUS1O60921 280 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 RNF8O76064 485 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 VDRP11473 427 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 GNAT1P11488 350 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 PECAM1P16284 738 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-202ENST00000315962 ATICP31939 592 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 GCKP35557 465 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 BRCC3P46736 316 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 CACNA2D1P54289 1103 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 EIF3BP55884 814 aaKnown RBP7.94□□□□□ -1.14
TRIM55-202ENST00000315962 MAP3K7CLP57077 242 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 ENPEPQ07075 957 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 CALCOCO2Q13137 446 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 DNAJC3Q13217 504 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 KLF1Q13351 362 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-202ENST00000315962 P3H1Q32P28 736 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 CGB2Q6NT52 195 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 SPOCD1Q6ZMY3 1216 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 ZNF365Q70YC5 407 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 OSTM1Q86WC4 334 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 ADGRF2Q8IZF7 708 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 PYROXD2Q8N2H3 581 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 ANKLE1Q8NAG6 615 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 RAET1EQ8TD07 263 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 RSRC1Q96IZ7 334 aaKnown RBP7.94□□□□□ -1.14
TRIM55-202ENST00000315962 VCPIP1Q96JH7 1222 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 KATNAL1Q9BW62 490 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 ALG13Q9NP73 1137 aaKnown RBP7.94□□□□□ -1.14
TRIM55-202ENST00000315962 TMEM30AQ9NV96 361 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 HESX1Q9UBX0 185 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 NKX1-2Q9UD57 310 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-202ENST00000315962 HMGCRP04035 888 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 NUDT17P0C025 328 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 SLC8A1P32418 973 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 STX2P32856 288 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 PBX3P40426 434 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 ARSEP51690 589 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 CDH6P55285 790 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 NME3Q13232 169 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 ITGA7Q13683 1181 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 TCEAL1Q15170 157 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 MDH1BQ5I0G3 518 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 AGMOQ6ZNB7 445 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 RFX6Q8HWS3 928 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 C4orf33Q8N1A6 199 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 FAM71DQ8N9W8 422 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 ACTL9Q8TC94 416 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 KHSRPQ92945 711 aaKnown RBP eCLIP7.94□□□□□ -1.14
TRIM55-202ENST00000315962 PGM2Q96G03 612 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 B3GALT6Q96L58 329 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 MED10Q9BTT4 135 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 TSPYL2Q9H2G4 693 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-202ENST00000315962 ETNK1Q9HBU6 452 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 CNTN3Q9P232 1028 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 PCYOX1Q9UHG3 505 aa7.94□□□□□ -1.14
TRIM55-202ENST00000315962 UBQLN1Q9UMX0 589 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms