RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CFAP97Q9P2B7 532 aa15.41■□□□□ 0.06
PPP1CA-201ENST00000312989 HELZP42694 1942 aaKnown RBP15.41■□□□□ 0.06
PPP1CA-201ENST00000312989 ZNF638Q14966 1978 aaKnown RBP15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 O00370 1275 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 TLR5O60602 858 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 MBL2P11226 248 aaPredicted RBP15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 ANP32AP39687 249 aaKnown RBP15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 IFNAR2P48551 515 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 ZNF132P52740 706 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 KCNH2Q12809 1159 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 LRRC32Q14392 662 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 DPCR1Q3MIW9 517 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 CCDC186Q7Z3E2 898 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 PIGZQ86VD9 579 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 SYNPOQ8N3V7 929 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 CPA6Q8N4T0 437 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 HEXIM2Q96MH2 286 aaKnown RBP15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 KREMEN1Q96MU8 473 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 KLF16Q9BXK1 252 aaPredicted RBP15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 UBXN6Q9BZV1 441 aa15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.4■□□□□ 0.06
PPP1CA-201ENST00000312989 ZNF292O60281 2723 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 A0A1W2PQH9 124 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 GNA14O95837 355 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 RHBDF2Q6PJF5 856 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 C12orf40Q86WS4 652 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 SFTPA1Q8IWL2 248 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 PHTF2Q8N3S3 785 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 ZNF276Q8N554 614 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 ANKRD52Q8NB46 1076 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 TTC16Q8NEE8 873 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 P2RY13Q9BPV8 354 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 POLR3BQ9NW08 1133 aaPredicted RBP15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 ZSCAN32Q9NX65 697 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 TSPAN16Q9UKR8 245 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 CNTN6Q9UQ52 1028 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 PCDHGA2Q9Y5H1 932 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 GVINP1Q7Z2Y8 2422 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 FANCMQ8IYD8 2048 aa15.39■□□□□ 0.05
PPP1CA-201ENST00000312989 E2F8A0AVK6 867 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 CHURC1-FNTBB4DL54 471 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 MDM4O15151 490 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 CALCAP01258 141 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 TBXAS1P24557 533 aaPredicted RBP15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 CCR3P51677 355 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 GCNT1Q02742 428 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 PDE4CQ08493 712 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 DHCR24Q15392 516 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 GOLGA7BQ2TAP0 167 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 KLHDC10Q6PID8 442 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 EHBP1Q8NDI1 1231 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 GPT2Q8TD30 523 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 TLR8Q9NR97 1041 aaKnown RBP15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 NUDT5Q9UKK9 219 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 DCHS1Q96JQ0 3298 aa15.38■□□□□ 0.05
PPP1CA-201ENST00000312989 RNF40O75150 1001 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 NFATC1O95644 943 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 AFPP02771 609 aaKnown RBP15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 CXCL12P48061 93 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 PM20D1Q6GTS8 502 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 DPY19L2P1Q6NXN4 242 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 Q6ZNB5 142 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 RRAGAQ7L523 313 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 DDX42Q86XP3 938 aaKnown RBP eCLIP15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 BBS7Q8IWZ6 715 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 ETFBKMTQ8IXQ9 262 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 MLKLQ8NB16 471 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 CD101Q93033 1021 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 CNOT6LQ96LI5 555 aaKnown RBP15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 NT5C1BQ96P26 610 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 INTS2Q9H0H0 1204 aaKnown RBP15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 EPC1Q9H2F5 836 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 SEMA4AQ9H3S1 761 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 CLIC5Q9NZA1 410 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 DMXL1Q9Y485 3027 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 OTOGLQ3ZCN5 2332 aa15.37■□□□□ 0.05
PPP1CA-201ENST00000312989 K7EQS6 105 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 XPO1O14980 1071 aaKnown RBP15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 LMNAP02545 664 aaKnown RBP15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 PAEPP09466 180 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 VDRP11473 427 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 RARGP13631 454 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 DRD1P21728 446 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 HOXA6P31267 233 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 PLA2G4AP47712 749 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 BCAT1P54687 386 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 APBA1Q02410 837 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 GRSF1Q12849 480 aaKnown RBP eCLIP15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 TMEM270Q6UE05 265 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 LCLAT1Q6UWP7 414 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 RBM43Q6ZSC3 357 aaKnown RBP15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 HTR3DQ70Z44 454 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 PPM1KQ8N3J5 372 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 NDRG1Q92597 394 aaKnown RBP15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 FAM126AQ9BYI3 521 aaPredicted RBP15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 HOXC11O43248 304 aaPredicted RBP15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 KLKB1P03952 638 aa15.36■□□□□ 0.05
PPP1CA-201ENST00000312989 SLC6A11P48066 632 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms