RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CLEC16AQ2KHT3 1053 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 CMTM8Q8IZV2 173 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 WDTC1Q8N5D0 677 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 KIAA1958Q8N8K9 716 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 SMARCD2Q92925 531 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 C18orf8Q96DM3 657 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 VCPIP1Q96JH7 1222 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 ABCC13Q9NSE7 274 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 OLA1Q9NTK5 396 aaKnown RBP18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 OBP2AQ9NY56 170 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 IGSF9Q9P2J2 1179 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 WDR35Q9P2L0 1181 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 CDH22Q9UJ99 828 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 NAGPAQ9UK23 515 aa18.8■□□□□ 0.6
SSSCA1-201ENST00000309328 E5RJQ4 531 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 CALB1P05937 261 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 CFHP08603 1231 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 MMP8P22894 467 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 YWHAGP61981 247 aaKnown RBP eCLIP18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 ZP2Q05996 745 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 EFHC1Q5JVL4 640 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 NAA35Q5VZE5 725 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 HGSNATQ68CP4 663 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 DDX42Q86XP3 938 aaKnown RBP eCLIP18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 PHF13Q86YI8 300 aaPredicted RBP18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 TRIM11Q96F44 468 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 RPGRIP1Q96KN7 1286 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 ASB16Q96NS5 453 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 MYADMQ96S97 322 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 CPXM1Q96SM3 734 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 NACA2Q9H009 215 aa18.79■□□□□ 0.6
SSSCA1-201ENST00000309328 TLR5O60602 858 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 OLFM2O95897 454 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 ABL1P00519 1130 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 OAS1P00973 400 aaKnown RBP18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 CKMP06732 381 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 HDCP19113 662 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 SSTR3P32745 418 aaPredicted RBP18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 GSCP56915 257 aaPredicted RBP18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 SLC7A9P82251 487 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 CYP4F8P98187 520 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 GOLGA8FQ08AF8 430 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 GOLGA8DPQ0D2H9 430 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 PTPN20Q4JDL3 420 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 BTBD8Q5XKL5 378 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 E4F1Q66K89 784 aaPredicted RBP18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 ZNF571Q7Z3V5 609 aaPredicted RBP18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 MAB21L3Q8N8X9 362 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 ZSCAN18Q8TBC5 510 aaPredicted RBP18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 ING5Q8WYH8 240 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 PANX2Q96RD6 677 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 DEF6Q9H4E7 631 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 TRPC7Q9HCX4 862 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 CHORDC1Q9UHD1 332 aaPredicted RBP18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 CYTH4Q9UIA0 394 aa18.78■□□□□ 0.6
SSSCA1-201ENST00000309328 PATJQ8NI35 1801 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 A0A1W2PQH9 124 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 C19orf67A6NJJ6 358 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 C2CD4DB7Z1M9 353 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 PAPSS1O43252 624 aaPredicted RBP18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 HSF2BPO75031 334 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 ECI2O75521 394 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 TCF3P15923 654 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 ATP5C1P36542 298 aaKnown RBP18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 GSDMDP57764 484 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 TXNDC8Q6A555 127 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 ARCQ7LC44 396 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 SCUBE3Q8IX30 993 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 FEZF2Q8TBJ5 459 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 RNF139Q8WU17 664 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 CPA5Q8WXQ8 436 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 ELSPBP1Q96BH3 223 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 MCRS1Q96EZ8 462 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 SLC46A2Q9BY10 475 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 POPDC2Q9HBU9 364 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 ZFP14Q9HCL3 533 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 RRN3Q9NYV6 651 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 DNMT3LQ9UJW3 386 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 ARHGAP26Q9UNA1 814 aa18.77■□□□□ 0.6
SSSCA1-201ENST00000309328 ANHXE9PGG2 379 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 DPYSL4O14531 572 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 LTFP02788 710 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 MYBL1P10243 752 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 SKILP12757 684 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 RARGP13631 454 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 GJA1P17302 382 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 KPNA1P52294 538 aaPredicted RBP18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 ADKP55263 362 aaKnown RBP18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 YWHAZP63104 245 aaKnown RBP18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 SLC6A3Q01959 620 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 BSPRYQ5W0U4 402 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 ACAD10Q6JQN1 1059 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 RSRC2Q7L4I2 434 aaKnown RBP18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 SLC26A9Q7LBE3 791 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 CELF5Q8N6W0 485 aaKnown RBP18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 TC2NQ8N9U0 490 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 DEPDC1BQ8WUY9 529 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms